Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALFQ53S48 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.16■□□□□ 0.66
ALFQ53S48 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
ALFQ53S48 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.16■□□□□ 0.66
ALFQ53S48 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ALFQ53S48 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.16■□□□□ 0.66
ALFQ53S48 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALFQ53S48 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALFQ53S48 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALFQ53S48 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALFQ53S48 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ALFQ53S48 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALFQ53S48 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALFQ53S48 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.16■□□□□ 0.66
ALFQ53S48 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.16■□□□□ 0.66
ALFQ53S48 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALFQ53S48 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ALFQ53S48 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 AC034236.2-201ENST00000606662 1610 ntBASIC19.15■□□□□ 0.66
ALFQ53S48 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ALFQ53S48 AL499627.1-201ENST00000569373 2188 ntBASIC19.15■□□□□ 0.66
ALFQ53S48 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ALFQ53S48 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ALFQ53S48 RNF152P1-201ENST00000397754 604 ntBASIC19.15■□□□□ 0.66
ALFQ53S48 TSPY5P-201ENST00000426936 936 ntBASIC19.15■□□□□ 0.66
ALFQ53S48 KRT18P23-201ENST00000435622 1283 ntBASIC19.15■□□□□ 0.66
ALFQ53S48 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.15■□□□□ 0.66
ALFQ53S48 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.15■□□□□ 0.66
ALFQ53S48 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.15■□□□□ 0.66
ALFQ53S48 AL049597.2-201ENST00000565575 961 ntBASIC19.15■□□□□ 0.66
ALFQ53S48 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.15■□□□□ 0.66
ALFQ53S48 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.15■□□□□ 0.66
ALFQ53S48 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.15■□□□□ 0.66
ALFQ53S48 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.15■□□□□ 0.66
ALFQ53S48 AC112497.1-201ENST00000624824 639 ntBASIC19.15■□□□□ 0.66
ALFQ53S48 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.15■□□□□ 0.66
ALFQ53S48 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.15■□□□□ 0.66
ALFQ53S48 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALFQ53S48 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ALFQ53S48 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.14■□□□□ 0.66
ALFQ53S48 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.14■□□□□ 0.66
ALFQ53S48 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.14■□□□□ 0.65
ALFQ53S48 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ALFQ53S48 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
ALFQ53S48 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ALFQ53S48 AP000523.1-201ENST00000398242 1049 ntBASIC19.14■□□□□ 0.65
ALFQ53S48 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.14■□□□□ 0.65
ALFQ53S48 MIR1224-201ENST00000408193 85 ntBASIC19.14■□□□□ 0.65
ALFQ53S48 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.14■□□□□ 0.65
ALFQ53S48 SEC1P-202ENST00000473944 940 ntBASIC19.14■□□□□ 0.65
ALFQ53S48 AC063952.2-201ENST00000498792 1227 ntBASIC19.14■□□□□ 0.65
ALFQ53S48 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.14■□□□□ 0.65
ALFQ53S48 AC010331.1-201ENST00000611423 582 ntBASIC19.14■□□□□ 0.65
ALFQ53S48 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.14■□□□□ 0.65
ALFQ53S48 AL031432.5-201ENST00000641059 760 ntBASIC19.14■□□□□ 0.65
ALFQ53S48 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALFQ53S48 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.14■□□□□ 0.65
ALFQ53S48 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ALFQ53S48 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALFQ53S48 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
ALFQ53S48 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.14■□□□□ 0.65
ALFQ53S48 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ALFQ53S48 AC093525.10-201ENST00000625130 1569 ntBASIC19.14■□□□□ 0.65
ALFQ53S48 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ALFQ53S48 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALFQ53S48 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.14■□□□□ 0.65
ALFQ53S48 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALFQ53S48 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALFQ53S48 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.14■□□□□ 0.65
ALFQ53S48 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALFQ53S48 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
ALFQ53S48 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALFQ53S48 TNXA-203ENST00000507684 2038 ntBASIC19.13■□□□□ 0.65
ALFQ53S48 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALFQ53S48 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALFQ53S48 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALFQ53S48 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ALFQ53S48 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALFQ53S48 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.13■□□□□ 0.65
ALFQ53S48 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.13■□□□□ 0.65
ALFQ53S48 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.13■□□□□ 0.65
ALFQ53S48 HOXB1-202ENST00000577092 1414 ntBASIC19.13■□□□□ 0.65
ALFQ53S48 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALFQ53S48 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.13■□□□□ 0.65
ALFQ53S48 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.13■□□□□ 0.65
ALFQ53S48 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms