Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
CDCA8Q53HL2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDCA8Q53HL2 AC079602.3-201ENST00000623931 403 ntBASIC25.7■■□□□ 1.7
CDCA8Q53HL2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC25.7■■□□□ 1.7
CDCA8Q53HL2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDCA8Q53HL2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDCA8Q53HL2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDCA8Q53HL2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC25.7■■□□□ 1.7
CDCA8Q53HL2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 AL163051.1-201ENST00000569214 1512 ntBASIC25.69■■□□□ 1.7
CDCA8Q53HL2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 AL391807.1-203ENST00000604392 2365 ntBASIC25.69■■□□□ 1.7
CDCA8Q53HL2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDCA8Q53HL2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 VENTXP5-201ENST00000523979 775 ntBASIC25.68■■□□□ 1.7
CDCA8Q53HL2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 AP000550.4-202ENST00000639755 178 ntBASIC25.68■■□□□ 1.7
CDCA8Q53HL2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDCA8Q53HL2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 SPDYE13P-201ENST00000445314 798 ntBASIC25.67■■□□□ 1.7
CDCA8Q53HL2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 AL358472.4-201ENST00000633140 710 ntBASIC25.67■■□□□ 1.7
CDCA8Q53HL2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDCA8Q53HL2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC25.66■■□□□ 1.7
CDCA8Q53HL2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDCA8Q53HL2 AC005332.1-201ENST00000577698 1310 ntBASIC25.66■■□□□ 1.7
CDCA8Q53HL2 MYLKP1-201ENST00000509077 1580 ntBASIC25.66■■□□□ 1.7
CDCA8Q53HL2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CDCA8Q53HL2 PCED1CP-201ENST00000419887 785 ntBASIC25.66■■□□□ 1.7
CDCA8Q53HL2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC25.66■■□□□ 1.7
CDCA8Q53HL2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDCA8Q53HL2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDCA8Q53HL2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDCA8Q53HL2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDCA8Q53HL2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC25.66■■□□□ 1.7
CDCA8Q53HL2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 AC116407.4-201ENST00000623319 1061 ntBASIC25.65■■□□□ 1.7
CDCA8Q53HL2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
CDCA8Q53HL2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms