Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.08■□□□□ 0.48
HLA-BQ31612 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
HLA-BQ31612 AL671883.3-201ENST00000603274 991 ntBASIC18.08■□□□□ 0.48
HLA-BQ31612 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.08■□□□□ 0.48
HLA-BQ31612 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
HLA-BQ31612 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.08■□□□□ 0.48
HLA-BQ31612 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-BQ31612 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-BQ31612 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-BQ31612 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HLA-BQ31612 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-BQ31612 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
HLA-BQ31612 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.08■□□□□ 0.48
HLA-BQ31612 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-BQ31612 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-BQ31612 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.07■□□□□ 0.48
HLA-BQ31612 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-BQ31612 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-BQ31612 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-BQ31612 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-BQ31612 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-BQ31612 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HLA-BQ31612 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HLA-BQ31612 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-BQ31612 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
HLA-BQ31612 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-BQ31612 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.07■□□□□ 0.48
HLA-BQ31612 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.07■□□□□ 0.48
HLA-BQ31612 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.07■□□□□ 0.48
HLA-BQ31612 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-BQ31612 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-BQ31612 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-BQ31612 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.07■□□□□ 0.48
HLA-BQ31612 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-BQ31612 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.07■□□□□ 0.48
HLA-BQ31612 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
HLA-BQ31612 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-BQ31612 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HLA-BQ31612 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
HLA-BQ31612 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-BQ31612 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-BQ31612 KRT89P-201ENST00000620027 1478 ntBASIC18.07■□□□□ 0.48
HLA-BQ31612 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-BQ31612 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-BQ31612 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-BQ31612 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-BQ31612 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-BQ31612 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-BQ31612 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-BQ31612 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-BQ31612 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-BQ31612 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HLA-BQ31612 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HLA-BQ31612 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HLA-BQ31612 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-BQ31612 AP001005.1-201ENST00000571755 1248 ntBASIC18.06■□□□□ 0.48
HLA-BQ31612 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-BQ31612 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-BQ31612 TP73-AS1-207ENST00000624167 988 ntBASIC18.06■□□□□ 0.48
HLA-BQ31612 AF228730.7-201ENST00000641842 219 ntBASIC18.06■□□□□ 0.48
HLA-BQ31612 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-BQ31612 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-BQ31612 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HLA-BQ31612 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-BQ31612 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-BQ31612 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-BQ31612 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HLA-BQ31612 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-BQ31612 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-BQ31612 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-BQ31612 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-BQ31612 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-BQ31612 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-BQ31612 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-BQ31612 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-BQ31612 POM121L3P-201ENST00000419331 1163 ntBASIC18.05■□□□□ 0.48
HLA-BQ31612 FAM197Y8-203ENST00000450145 560 ntBASIC18.05■□□□□ 0.48
HLA-BQ31612 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.05■□□□□ 0.48
HLA-BQ31612 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.05■□□□□ 0.48
HLA-BQ31612 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.05■□□□□ 0.48
HLA-BQ31612 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HLA-BQ31612 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-BQ31612 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-BQ31612 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-BQ31612 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-BQ31612 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.05■□□□□ 0.48
HLA-BQ31612 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-BQ31612 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-BQ31612 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
HLA-BQ31612 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-BQ31612 FP475955.4-201ENST00000623131 1990 ntBASIC18.04■□□□□ 0.48
HLA-BQ31612 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-BQ31612 IL9RP2-201ENST00000423948 1312 ntBASIC18.04■□□□□ 0.48
HLA-BQ31612 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-BQ31612 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HLA-BQ31612 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-BQ31612 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-BQ31612 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HLA-BQ31612 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HLA-BQ31612 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms