Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC064836.3-201ENST00000607928 673 ntBASIC25.12■■□□□ 1.61
COL16A1Q07092 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL16A1Q07092 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL16A1Q07092 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC25.12■■□□□ 1.61
COL16A1Q07092 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.12■■□□□ 1.61
COL16A1Q07092 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
COL16A1Q07092 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL16A1Q07092 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL16A1Q07092 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL16A1Q07092 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC25.12■■□□□ 1.61
COL16A1Q07092 ABCD1P5-201ENST00000445663 754 ntBASIC25.12■■□□□ 1.61
COL16A1Q07092 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC25.12■■□□□ 1.61
COL16A1Q07092 AC106028.4-201ENST00000614509 607 ntBASIC25.12■■□□□ 1.61
COL16A1Q07092 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
COL16A1Q07092 KATNBL1P6-202ENST00000562413 1466 ntBASIC25.11■■□□□ 1.61
COL16A1Q07092 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
COL16A1Q07092 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC25.11■■□□□ 1.61
COL16A1Q07092 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC25.11■■□□□ 1.61
COL16A1Q07092 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC25.11■■□□□ 1.61
COL16A1Q07092 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC25.11■■□□□ 1.61
COL16A1Q07092 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
COL16A1Q07092 AC105339.3-201ENST00000560043 636 ntBASIC25.11■■□□□ 1.61
COL16A1Q07092 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
COL16A1Q07092 AL356309.3-201ENST00000624132 1934 ntBASIC25.11■■□□□ 1.61
COL16A1Q07092 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
COL16A1Q07092 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL16A1Q07092 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC25.1■■□□□ 1.61
COL16A1Q07092 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL16A1Q07092 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC25.1■■□□□ 1.61
COL16A1Q07092 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC25.1■■□□□ 1.61
COL16A1Q07092 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC25.1■■□□□ 1.61
COL16A1Q07092 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.1■■□□□ 1.61
COL16A1Q07092 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL16A1Q07092 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL16A1Q07092 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL16A1Q07092 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL16A1Q07092 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL16A1Q07092 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL16A1Q07092 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL16A1Q07092 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC25.09■■□□□ 1.61
COL16A1Q07092 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
COL16A1Q07092 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC25.09■■□□□ 1.61
COL16A1Q07092 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
COL16A1Q07092 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
COL16A1Q07092 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC25.09■■□□□ 1.61
COL16A1Q07092 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL16A1Q07092 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL16A1Q07092 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
COL16A1Q07092 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL16A1Q07092 AC002310.6-201ENST00000624451 1377 ntBASIC25.09■■□□□ 1.61
COL16A1Q07092 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL16A1Q07092 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL16A1Q07092 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL16A1Q07092 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC25.08■■□□□ 1.61
COL16A1Q07092 INIP-202ENST00000374236 874 ntTSL 2 BASIC25.08■■□□□ 1.61
COL16A1Q07092 BCRP1-201ENST00000444246 691 ntBASIC25.08■■□□□ 1.61
COL16A1Q07092 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC25.08■■□□□ 1.61
COL16A1Q07092 COX5A-206ENST00000568783 571 ntTSL 3 BASIC25.08■■□□□ 1.61
COL16A1Q07092 MIR4469-201ENST00000583919 79 ntBASIC25.08■■□□□ 1.61
COL16A1Q07092 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC25.08■■□□□ 1.61
COL16A1Q07092 AC011467.2-201ENST00000598425 242 ntBASIC25.08■■□□□ 1.61
COL16A1Q07092 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC25.08■■□□□ 1.61
COL16A1Q07092 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL16A1Q07092 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
COL16A1Q07092 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL16A1Q07092 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL16A1Q07092 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
COL16A1Q07092 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC25.08■■□□□ 1.61
COL16A1Q07092 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL16A1Q07092 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL16A1Q07092 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
COL16A1Q07092 KLK8-202ENST00000320838 456 ntTSL 5 BASIC25.08■■□□□ 1.6
COL16A1Q07092 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC25.08■■□□□ 1.6
COL16A1Q07092 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC25.08■■□□□ 1.6
COL16A1Q07092 AC005829.1-201ENST00000570002 483 ntBASIC25.08■■□□□ 1.6
COL16A1Q07092 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC25.08■■□□□ 1.6
COL16A1Q07092 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.08■■□□□ 1.6
COL16A1Q07092 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL16A1Q07092 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL16A1Q07092 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.07■■□□□ 1.6
COL16A1Q07092 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
COL16A1Q07092 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
COL16A1Q07092 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
COL16A1Q07092 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC25.07■■□□□ 1.6
COL16A1Q07092 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL16A1Q07092 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC25.07■■□□□ 1.6
COL16A1Q07092 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL16A1Q07092 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL16A1Q07092 CNN2P11-201ENST00000429351 262 ntBASIC25.07■■□□□ 1.6
COL16A1Q07092 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
COL16A1Q07092 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC25.07■■□□□ 1.6
COL16A1Q07092 SNHG9-202ENST00000564014 471 ntBASIC25.07■■□□□ 1.6
COL16A1Q07092 AP002472.1-201ENST00000577490 586 ntBASIC25.07■■□□□ 1.6
COL16A1Q07092 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC25.07■■□□□ 1.6
COL16A1Q07092 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC25.07■■□□□ 1.6
COL16A1Q07092 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC25.07■■□□□ 1.6
COL16A1Q07092 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL16A1Q07092 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL16A1Q07092 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.06■■□□□ 1.6
COL16A1Q07092 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms