Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEP78395 AC068587.9-201ENST00000641814 219 ntBASIC18.82■□□□□ 0.6
PRAMEP78395 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEP78395 AC005082.1-201ENST00000413042 2259 ntBASIC18.82■□□□□ 0.6
PRAMEP78395 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEP78395 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEP78395 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEP78395 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEP78395 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRAMEP78395 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.82■□□□□ 0.6
PRAMEP78395 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.82■□□□□ 0.6
PRAMEP78395 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRAMEP78395 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.81■□□□□ 0.6
PRAMEP78395 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEP78395 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEP78395 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEP78395 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PRAMEP78395 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEP78395 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEP78395 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEP78395 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEP78395 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEP78395 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEP78395 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEP78395 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEP78395 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEP78395 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEP78395 AP003071.4-201ENST00000562276 1284 ntBASIC18.81■□□□□ 0.6
PRAMEP78395 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.81■□□□□ 0.6
PRAMEP78395 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEP78395 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.81■□□□□ 0.6
PRAMEP78395 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.81■□□□□ 0.6
PRAMEP78395 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEP78395 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PRAMEP78395 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEP78395 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.81■□□□□ 0.6
PRAMEP78395 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
PRAMEP78395 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEP78395 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEP78395 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEP78395 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEP78395 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRAMEP78395 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEP78395 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.81■□□□□ 0.6
PRAMEP78395 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
PRAMEP78395 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEP78395 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEP78395 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEP78395 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEP78395 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEP78395 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEP78395 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEP78395 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEP78395 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEP78395 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEP78395 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.8■□□□□ 0.6
PRAMEP78395 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEP78395 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEP78395 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
PRAMEP78395 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEP78395 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.8■□□□□ 0.6
PRAMEP78395 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEP78395 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEP78395 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEP78395 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEP78395 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEP78395 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEP78395 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PRAMEP78395 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEP78395 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEP78395 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEP78395 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEP78395 RCC2P3-201ENST00000418112 1537 ntBASIC18.79■□□□□ 0.6
PRAMEP78395 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PRAMEP78395 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.79■□□□□ 0.6
PRAMEP78395 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.79■□□□□ 0.6
PRAMEP78395 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.79■□□□□ 0.6
PRAMEP78395 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.79■□□□□ 0.6
PRAMEP78395 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PRAMEP78395 CRYGFP-201ENST00000418459 633 ntBASIC18.79■□□□□ 0.6
PRAMEP78395 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 MIR4785-201ENST00000585005 73 ntBASIC18.79■□□□□ 0.6
PRAMEP78395 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
PRAMEP78395 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
PRAMEP78395 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.79■□□□□ 0.6
PRAMEP78395 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 MTMR9LP-203ENST00000426597 1545 ntBASIC18.79■□□□□ 0.6
PRAMEP78395 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.79■□□□□ 0.6
PRAMEP78395 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms