Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.22■□□□□ 0.35
SMIM11AP58511 UNC93B5-201ENST00000530315 699 ntBASIC17.22■□□□□ 0.35
SMIM11AP58511 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM11AP58511 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.22■□□□□ 0.35
SMIM11AP58511 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM11AP58511 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM11AP58511 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM11AP58511 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.22■□□□□ 0.35
SMIM11AP58511 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
SMIM11AP58511 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM11AP58511 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM11AP58511 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM11AP58511 PCDHB18P-201ENST00000524813 2368 ntBASIC17.22■□□□□ 0.35
SMIM11AP58511 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM11AP58511 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.21■□□□□ 0.35
SMIM11AP58511 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.21■□□□□ 0.35
SMIM11AP58511 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMIM11AP58511 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.21■□□□□ 0.35
SMIM11AP58511 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SMIM11AP58511 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.21■□□□□ 0.35
SMIM11AP58511 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.21■□□□□ 0.35
SMIM11AP58511 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 KRT17P3-201ENST00000420566 1262 ntBASIC17.21■□□□□ 0.35
SMIM11AP58511 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.21■□□□□ 0.35
SMIM11AP58511 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 Z85996.1-201ENST00000494644 937 ntBASIC17.21■□□□□ 0.35
SMIM11AP58511 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.21■□□□□ 0.35
SMIM11AP58511 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMIM11AP58511 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.21■□□□□ 0.35
SMIM11AP58511 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.21■□□□□ 0.35
SMIM11AP58511 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.21■□□□□ 0.35
SMIM11AP58511 AL109923.1-201ENST00000618799 583 ntBASIC17.21■□□□□ 0.35
SMIM11AP58511 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.21■□□□□ 0.35
SMIM11AP58511 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SMIM11AP58511 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM11AP58511 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SMIM11AP58511 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMIM11AP58511 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.21■□□□□ 0.34
SMIM11AP58511 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
SMIM11AP58511 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SMIM11AP58511 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM11AP58511 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM11AP58511 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM11AP58511 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
SMIM11AP58511 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM11AP58511 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.2■□□□□ 0.34
SMIM11AP58511 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SMIM11AP58511 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.2■□□□□ 0.34
SMIM11AP58511 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.2■□□□□ 0.34
SMIM11AP58511 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM11AP58511 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.2■□□□□ 0.34
SMIM11AP58511 AC131212.4-201ENST00000623606 975 ntBASIC17.2■□□□□ 0.34
SMIM11AP58511 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SMIM11AP58511 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM11AP58511 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM11AP58511 KRT8P45-201ENST00000414328 1447 ntBASIC17.2■□□□□ 0.34
SMIM11AP58511 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM11AP58511 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM11AP58511 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM11AP58511 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.19■□□□□ 0.34
SMIM11AP58511 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM11AP58511 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SMIM11AP58511 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM11AP58511 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.19■□□□□ 0.34
SMIM11AP58511 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.19■□□□□ 0.34
SMIM11AP58511 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM11AP58511 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM11AP58511 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM11AP58511 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM11AP58511 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SMIM11AP58511 KRT16P5-201ENST00000455284 522 ntBASIC17.19■□□□□ 0.34
SMIM11AP58511 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SMIM11AP58511 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.19■□□□□ 0.34
SMIM11AP58511 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.19■□□□□ 0.34
SMIM11AP58511 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SMIM11AP58511 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.19■□□□□ 0.34
SMIM11AP58511 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.19■□□□□ 0.34
SMIM11AP58511 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.19■□□□□ 0.34
SMIM11AP58511 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.19■□□□□ 0.34
SMIM11AP58511 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM11AP58511 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
SMIM11AP58511 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SMIM11AP58511 KRT8P11-201ENST00000409686 1436 ntBASIC17.19■□□□□ 0.34
SMIM11AP58511 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.19■□□□□ 0.34
SMIM11AP58511 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMIM11AP58511 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
SMIM11AP58511 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.19■□□□□ 0.34
SMIM11AP58511 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms