Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH12P55289 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH12P55289 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH12P55289 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH12P55289 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDH12P55289 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH12P55289 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH12P55289 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH12P55289 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH12P55289 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH12P55289 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH12P55289 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH12P55289 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH12P55289 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH12P55289 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
CDH12P55289 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.39■□□□□ 0.38
CDH12P55289 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.39■□□□□ 0.38
CDH12P55289 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
CDH12P55289 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH12P55289 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDH12P55289 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH12P55289 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH12P55289 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH12P55289 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.39■□□□□ 0.37
CDH12P55289 AC124016.1-201ENST00000609552 612 ntBASIC17.39■□□□□ 0.37
CDH12P55289 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 AC067852.2-201ENST00000590513 2313 ntBASIC17.39■□□□□ 0.37
CDH12P55289 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH12P55289 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDH12P55289 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
CDH12P55289 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDH12P55289 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CDH12P55289 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH12P55289 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH12P55289 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH12P55289 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDH12P55289 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDH12P55289 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH12P55289 KRT8P41-201ENST00000533985 1514 ntBASIC17.38■□□□□ 0.37
CDH12P55289 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CDH12P55289 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH12P55289 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH12P55289 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH12P55289 RN7SL471P-201ENST00000580476 299 ntBASIC17.38■□□□□ 0.37
CDH12P55289 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDH12P55289 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.38■□□□□ 0.37
CDH12P55289 AC073648.6-201ENST00000641589 218 ntBASIC17.38■□□□□ 0.37
CDH12P55289 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH12P55289 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH12P55289 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDH12P55289 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH12P55289 HEIH-201ENST00000623091 1652 ntBASIC17.38■□□□□ 0.37
CDH12P55289 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH12P55289 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH12P55289 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH12P55289 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH12P55289 OR6D1P-202ENST00000641007 5290 ntBASIC17.38■□□□□ 0.37
CDH12P55289 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH12P55289 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH12P55289 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH12P55289 AL162741.1-201ENST00000565563 1558 ntBASIC17.37■□□□□ 0.37
CDH12P55289 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDH12P55289 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDH12P55289 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH12P55289 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH12P55289 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH12P55289 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms