Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP1B3P54709 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP1B3P54709 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP1B3P54709 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP1B3P54709 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP1B3P54709 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP1B3P54709 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP1B3P54709 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP1B3P54709 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ATP1B3P54709 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP1B3P54709 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ATP1B3P54709 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP1B3P54709 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ATP1B3P54709 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP1B3P54709 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP1B3P54709 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP1B3P54709 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP1B3P54709 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP1B3P54709 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP1B3P54709 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.19■□□□□ 0.18
ATP1B3P54709 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP1B3P54709 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP1B3P54709 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP1B3P54709 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP1B3P54709 Z85996.1-201ENST00000494644 937 ntBASIC16.19■□□□□ 0.18
ATP1B3P54709 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP1B3P54709 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP1B3P54709 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP1B3P54709 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.19■□□□□ 0.18
ATP1B3P54709 AC006058.3-201ENST00000606217 1069 ntBASIC16.19■□□□□ 0.18
ATP1B3P54709 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ATP1B3P54709 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP1B3P54709 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP1B3P54709 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP1B3P54709 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP1B3P54709 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ATP1B3P54709 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP1B3P54709 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP1B3P54709 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
ATP1B3P54709 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.19■□□□□ 0.18
ATP1B3P54709 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP1B3P54709 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP1B3P54709 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP1B3P54709 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ATP1B3P54709 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ATP1B3P54709 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.18■□□□□ 0.18
ATP1B3P54709 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.18■□□□□ 0.18
ATP1B3P54709 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.18■□□□□ 0.18
ATP1B3P54709 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 AP002982.1-201ENST00000492365 877 ntBASIC16.18■□□□□ 0.18
ATP1B3P54709 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.18■□□□□ 0.18
ATP1B3P54709 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.18■□□□□ 0.18
ATP1B3P54709 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.18■□□□□ 0.18
ATP1B3P54709 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 AC073648.6-201ENST00000641589 218 ntBASIC16.18■□□□□ 0.18
ATP1B3P54709 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.18■□□□□ 0.18
ATP1B3P54709 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.18■□□□□ 0.18
ATP1B3P54709 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
ATP1B3P54709 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ATP1B3P54709 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP1B3P54709 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1B3P54709 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
ATP1B3P54709 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1B3P54709 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1B3P54709 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP1B3P54709 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1B3P54709 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1B3P54709 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1B3P54709 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP1B3P54709 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1B3P54709 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1B3P54709 NIFKP9-201ENST00000419265 221 ntBASIC16.17■□□□□ 0.18
ATP1B3P54709 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP1B3P54709 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP1B3P54709 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP1B3P54709 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.17■□□□□ 0.18
ATP1B3P54709 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP1B3P54709 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.17■□□□□ 0.18
ATP1B3P54709 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms