Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDK7P50613 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK7P50613 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDK7P50613 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK7P50613 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK7P50613 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK7P50613 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK7P50613 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK7P50613 SAPCD2P3-201ENST00000455031 850 ntBASIC20.59■□□□□ 0.89
CDK7P50613 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.59■□□□□ 0.89
CDK7P50613 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.59■□□□□ 0.89
CDK7P50613 AL592071.1-201ENST00000611956 408 ntBASIC20.59■□□□□ 0.89
CDK7P50613 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.59■□□□□ 0.89
CDK7P50613 AC124864.1-201ENST00000623408 392 ntBASIC20.59■□□□□ 0.89
CDK7P50613 AC117500.6-201ENST00000624871 588 ntBASIC20.59■□□□□ 0.89
CDK7P50613 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDK7P50613 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CDK7P50613 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK7P50613 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK7P50613 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.59■□□□□ 0.89
CDK7P50613 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK7P50613 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.58■□□□□ 0.89
CDK7P50613 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.58■□□□□ 0.89
CDK7P50613 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK7P50613 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK7P50613 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK7P50613 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.58■□□□□ 0.89
CDK7P50613 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CDK7P50613 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.58■□□□□ 0.89
CDK7P50613 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK7P50613 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CDK7P50613 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.58■□□□□ 0.89
CDK7P50613 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CDK7P50613 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.58■□□□□ 0.89
CDK7P50613 AP005901.3-202ENST00000581653 237 ntBASIC20.58■□□□□ 0.89
CDK7P50613 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
CDK7P50613 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDK7P50613 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.58■□□□□ 0.89
CDK7P50613 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.58■□□□□ 0.89
CDK7P50613 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDK7P50613 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.58■□□□□ 0.88
CDK7P50613 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDK7P50613 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDK7P50613 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDK7P50613 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.58■□□□□ 0.88
CDK7P50613 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK7P50613 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK7P50613 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.57■□□□□ 0.88
CDK7P50613 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CDK7P50613 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK7P50613 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK7P50613 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK7P50613 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK7P50613 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK7P50613 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK7P50613 MIR574-201ENST00000385209 96 ntBASIC20.57■□□□□ 0.88
CDK7P50613 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK7P50613 GUSBP12-201ENST00000513727 720 ntBASIC20.57■□□□□ 0.88
CDK7P50613 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK7P50613 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK7P50613 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.57■□□□□ 0.88
CDK7P50613 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.57■□□□□ 0.88
CDK7P50613 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK7P50613 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.57■□□□□ 0.88
CDK7P50613 AF228730.7-201ENST00000641842 219 ntBASIC20.57■□□□□ 0.88
CDK7P50613 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CDK7P50613 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.57■□□□□ 0.88
CDK7P50613 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK7P50613 NSUN5P1-202ENST00000421140 1535 ntBASIC20.57■□□□□ 0.88
CDK7P50613 NSUN5P2-203ENST00000457352 1529 ntBASIC20.57■□□□□ 0.88
CDK7P50613 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK7P50613 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.56■□□□□ 0.88
CDK7P50613 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CDK7P50613 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.56■□□□□ 0.88
CDK7P50613 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.56■□□□□ 0.88
CDK7P50613 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CDK7P50613 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.56■□□□□ 0.88
CDK7P50613 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CDK7P50613 AC139530.3-201ENST00000620344 690 ntBASIC20.56■□□□□ 0.88
CDK7P50613 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.56■□□□□ 0.88
CDK7P50613 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.56■□□□□ 0.88
CDK7P50613 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK7P50613 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms