Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLK2P49760 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLK2P49760 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
CLK2P49760 HLA-F-220ENST00000434407 884 ntBASIC21.1■□□□□ 0.97
CLK2P49760 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.1■□□□□ 0.97
CLK2P49760 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
CLK2P49760 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLK2P49760 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CLK2P49760 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.09■□□□□ 0.97
CLK2P49760 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLK2P49760 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK2P49760 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK2P49760 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK2P49760 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.09■□□□□ 0.97
CLK2P49760 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK2P49760 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLK2P49760 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLK2P49760 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.09■□□□□ 0.97
CLK2P49760 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.09■□□□□ 0.97
CLK2P49760 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.09■□□□□ 0.97
CLK2P49760 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.09■□□□□ 0.97
CLK2P49760 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.09■□□□□ 0.97
CLK2P49760 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CLK2P49760 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.09■□□□□ 0.97
CLK2P49760 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLK2P49760 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK2P49760 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CLK2P49760 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.09■□□□□ 0.97
CLK2P49760 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CLK2P49760 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.09■□□□□ 0.97
CLK2P49760 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.09■□□□□ 0.97
CLK2P49760 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CLK2P49760 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLK2P49760 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.08■□□□□ 0.97
CLK2P49760 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLK2P49760 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLK2P49760 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLK2P49760 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.08■□□□□ 0.97
CLK2P49760 PVRIG2P-201ENST00000435460 978 ntBASIC21.08■□□□□ 0.97
CLK2P49760 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.08■□□□□ 0.97
CLK2P49760 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLK2P49760 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.08■□□□□ 0.97
CLK2P49760 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.08■□□□□ 0.97
CLK2P49760 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.08■□□□□ 0.97
CLK2P49760 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CLK2P49760 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLK2P49760 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLK2P49760 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLK2P49760 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CLK2P49760 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLK2P49760 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLK2P49760 AL391807.1-203ENST00000604392 2365 ntBASIC21.08■□□□□ 0.96
CLK2P49760 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLK2P49760 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.08■□□□□ 0.96
CLK2P49760 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLK2P49760 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLK2P49760 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK2P49760 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.07■□□□□ 0.96
CLK2P49760 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK2P49760 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
CLK2P49760 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.07■□□□□ 0.96
CLK2P49760 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK2P49760 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CLK2P49760 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK2P49760 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CLK2P49760 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK2P49760 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK2P49760 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.07■□□□□ 0.96
CLK2P49760 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.07■□□□□ 0.96
CLK2P49760 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.07■□□□□ 0.96
CLK2P49760 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.07■□□□□ 0.96
CLK2P49760 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK2P49760 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.07■□□□□ 0.96
CLK2P49760 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLK2P49760 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.07■□□□□ 0.96
CLK2P49760 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK2P49760 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLK2P49760 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK2P49760 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.07■□□□□ 0.96
CLK2P49760 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.07■□□□□ 0.96
CLK2P49760 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLK2P49760 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLK2P49760 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLK2P49760 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CLK2P49760 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
CLK2P49760 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.06■□□□□ 0.96
CLK2P49760 LINC01311-201ENST00000565162 1445 ntBASIC21.06■□□□□ 0.96
CLK2P49760 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms