Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCC3P46736 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRCC3P46736 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCC3P46736 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCC3P46736 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCC3P46736 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.82■□□□□ 0.76
BRCC3P46736 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
BRCC3P46736 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
BRCC3P46736 DUSP5P1-201ENST00000441325 1139 ntBASIC19.82■□□□□ 0.76
BRCC3P46736 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.82■□□□□ 0.76
BRCC3P46736 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
BRCC3P46736 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
BRCC3P46736 CLEC4GP1-201ENST00000596555 870 ntBASIC19.82■□□□□ 0.76
BRCC3P46736 AC012313.10-201ENST00000623509 926 ntBASIC19.82■□□□□ 0.76
BRCC3P46736 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCC3P46736 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.82■□□□□ 0.76
BRCC3P46736 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BRCC3P46736 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCC3P46736 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BRCC3P46736 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
BRCC3P46736 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.81■□□□□ 0.76
BRCC3P46736 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
BRCC3P46736 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.81■□□□□ 0.76
BRCC3P46736 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.81■□□□□ 0.76
BRCC3P46736 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
BRCC3P46736 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
BRCC3P46736 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
BRCC3P46736 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
BRCC3P46736 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.81■□□□□ 0.76
BRCC3P46736 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.81■□□□□ 0.76
BRCC3P46736 TSSC2-201ENST00000450217 709 ntBASIC19.81■□□□□ 0.76
BRCC3P46736 BX276092.5-203ENST00000456199 560 ntBASIC19.81■□□□□ 0.76
BRCC3P46736 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.81■□□□□ 0.76
BRCC3P46736 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.81■□□□□ 0.76
BRCC3P46736 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.81■□□□□ 0.76
BRCC3P46736 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.81■□□□□ 0.76
BRCC3P46736 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.81■□□□□ 0.76
BRCC3P46736 KRT8P50-201ENST00000562022 1438 ntBASIC19.81■□□□□ 0.76
BRCC3P46736 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
BRCC3P46736 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.81■□□□□ 0.76
BRCC3P46736 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BRCC3P46736 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
BRCC3P46736 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.8■□□□□ 0.76
BRCC3P46736 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.8■□□□□ 0.76
BRCC3P46736 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
BRCC3P46736 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.8■□□□□ 0.76
BRCC3P46736 AC093525.10-201ENST00000625130 1569 ntBASIC19.8■□□□□ 0.76
BRCC3P46736 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
BRCC3P46736 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.8■□□□□ 0.76
BRCC3P46736 PVRIG2P-201ENST00000435460 978 ntBASIC19.8■□□□□ 0.76
BRCC3P46736 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.8■□□□□ 0.76
BRCC3P46736 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.8■□□□□ 0.76
BRCC3P46736 AL121672.3-201ENST00000608644 468 ntBASIC19.8■□□□□ 0.76
BRCC3P46736 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
BRCC3P46736 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.8■□□□□ 0.76
BRCC3P46736 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.8■□□□□ 0.76
BRCC3P46736 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.8■□□□□ 0.76
BRCC3P46736 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BRCC3P46736 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCC3P46736 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.79■□□□□ 0.76
BRCC3P46736 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCC3P46736 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCC3P46736 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCC3P46736 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRCC3P46736 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCC3P46736 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCC3P46736 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCC3P46736 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCC3P46736 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.79■□□□□ 0.76
BRCC3P46736 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCC3P46736 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCC3P46736 AP002383.4-201ENST00000442518 975 ntBASIC19.79■□□□□ 0.76
BRCC3P46736 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.79■□□□□ 0.76
BRCC3P46736 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms