Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.89■□□□□ 0.61
HADHAP40939 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.89■□□□□ 0.61
HADHAP40939 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HADHAP40939 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HADHAP40939 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HADHAP40939 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.89■□□□□ 0.61
HADHAP40939 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.89■□□□□ 0.61
HADHAP40939 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HADHAP40939 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.89■□□□□ 0.61
HADHAP40939 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HADHAP40939 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HADHAP40939 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.89■□□□□ 0.61
HADHAP40939 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HADHAP40939 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HADHAP40939 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HADHAP40939 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.88■□□□□ 0.61
HADHAP40939 BICD1-207ENST00000551848 1962 ntBASIC18.88■□□□□ 0.61
HADHAP40939 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HADHAP40939 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.88■□□□□ 0.61
HADHAP40939 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
HADHAP40939 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.88■□□□□ 0.61
HADHAP40939 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.88■□□□□ 0.61
HADHAP40939 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.88■□□□□ 0.61
HADHAP40939 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HADHAP40939 AL390961.4-201ENST00000623958 2535 ntBASIC18.88■□□□□ 0.61
HADHAP40939 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.87■□□□□ 0.61
HADHAP40939 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HADHAP40939 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HADHAP40939 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HADHAP40939 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HADHAP40939 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HADHAP40939 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HADHAP40939 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
HADHAP40939 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HADHAP40939 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HADHAP40939 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.87■□□□□ 0.61
HADHAP40939 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.87■□□□□ 0.61
HADHAP40939 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.87■□□□□ 0.61
HADHAP40939 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HADHAP40939 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.87■□□□□ 0.61
HADHAP40939 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.87■□□□□ 0.61
HADHAP40939 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HADHAP40939 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.87■□□□□ 0.61
HADHAP40939 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.87■□□□□ 0.61
HADHAP40939 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.87■□□□□ 0.61
HADHAP40939 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HADHAP40939 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.87■□□□□ 0.61
HADHAP40939 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HADHAP40939 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HADHAP40939 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.86■□□□□ 0.61
HADHAP40939 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.86■□□□□ 0.61
HADHAP40939 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.86■□□□□ 0.61
HADHAP40939 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HADHAP40939 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.86■□□□□ 0.61
HADHAP40939 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHAP40939 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HADHAP40939 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.85■□□□□ 0.61
HADHAP40939 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.85■□□□□ 0.61
HADHAP40939 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HADHAP40939 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.85■□□□□ 0.61
HADHAP40939 AL355075.4-201ENST00000554988 638 ntBASIC18.85■□□□□ 0.61
HADHAP40939 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
HADHAP40939 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.85■□□□□ 0.61
HADHAP40939 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms