Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT9P35527 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT9P35527 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
KRT9P35527 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT9P35527 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT9P35527 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
KRT9P35527 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.41■□□□□ 0.86
KRT9P35527 AL353708.3-201ENST00000610272 989 ntBASIC20.41■□□□□ 0.86
KRT9P35527 AL445675.2-201ENST00000620291 557 ntBASIC20.41■□□□□ 0.86
KRT9P35527 AC131212.4-201ENST00000623606 975 ntBASIC20.41■□□□□ 0.86
KRT9P35527 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT9P35527 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
KRT9P35527 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
KRT9P35527 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT9P35527 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
KRT9P35527 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT9P35527 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT9P35527 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT9P35527 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
KRT9P35527 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT9P35527 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT9P35527 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT9P35527 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT9P35527 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.4■□□□□ 0.86
KRT9P35527 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT9P35527 KSR1P1-201ENST00000446298 240 ntBASIC20.4■□□□□ 0.86
KRT9P35527 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT9P35527 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT9P35527 RARRES2P10-201ENST00000564312 460 ntBASIC20.4■□□□□ 0.86
KRT9P35527 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT9P35527 AC090340.1-201ENST00000620778 4980 ntBASIC20.4■□□□□ 0.86
KRT9P35527 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.4■□□□□ 0.86
KRT9P35527 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT9P35527 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT9P35527 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.4■□□□□ 0.86
KRT9P35527 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
KRT9P35527 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT9P35527 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
KRT9P35527 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT9P35527 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT9P35527 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KRT9P35527 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT9P35527 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT9P35527 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KRT9P35527 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT9P35527 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT9P35527 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT9P35527 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.39■□□□□ 0.85
KRT9P35527 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 AL158047.1-201ENST00000445918 881 ntBASIC20.39■□□□□ 0.85
KRT9P35527 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT9P35527 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.39■□□□□ 0.85
KRT9P35527 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.39■□□□□ 0.85
KRT9P35527 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.39■□□□□ 0.85
KRT9P35527 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.39■□□□□ 0.85
KRT9P35527 AC068587.9-201ENST00000641814 219 ntBASIC20.39■□□□□ 0.85
KRT9P35527 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
KRT9P35527 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
KRT9P35527 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.39■□□□□ 0.85
KRT9P35527 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT9P35527 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.38■□□□□ 0.85
KRT9P35527 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
KRT9P35527 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT9P35527 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT9P35527 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT9P35527 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms