Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.22■□□□□ 0.99
CLCN1P35523 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CLCN1P35523 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CLCN1P35523 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
CLCN1P35523 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.21■□□□□ 0.99
CLCN1P35523 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.21■□□□□ 0.99
CLCN1P35523 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.21■□□□□ 0.99
CLCN1P35523 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.21■□□□□ 0.99
CLCN1P35523 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.21■□□□□ 0.99
CLCN1P35523 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.21■□□□□ 0.99
CLCN1P35523 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 ANKRD26P3-201ENST00000454044 2748 ntBASIC21.21■□□□□ 0.99
CLCN1P35523 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 PCDH8P1-201ENST00000428983 2773 ntBASIC21.21■□□□□ 0.99
CLCN1P35523 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.21■□□□□ 0.99
CLCN1P35523 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN1P35523 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CLCN1P35523 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
CLCN1P35523 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN1P35523 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CLCN1P35523 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.2■□□□□ 0.98
CLCN1P35523 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN1P35523 AP001271.2-201ENST00000624018 1556 ntBASIC21.2■□□□□ 0.98
CLCN1P35523 PHGDH-210ENST00000641115 1638 ntBASIC21.2■□□□□ 0.98
CLCN1P35523 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN1P35523 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN1P35523 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CLCN1P35523 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN1P35523 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN1P35523 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CLCN1P35523 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN1P35523 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.2■□□□□ 0.98
CLCN1P35523 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.2■□□□□ 0.98
CLCN1P35523 AC005829.2-201ENST00000571422 1056 ntBASIC21.2■□□□□ 0.98
CLCN1P35523 AC104771.1-201ENST00000603335 964 ntBASIC21.2■□□□□ 0.98
CLCN1P35523 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN1P35523 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CLCN1P35523 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CLCN1P35523 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CLCN1P35523 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN1P35523 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CLCN1P35523 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CLCN1P35523 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN1P35523 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN1P35523 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLCN1P35523 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.2■□□□□ 0.98
CLCN1P35523 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.2■□□□□ 0.98
CLCN1P35523 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CLCN1P35523 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CLCN1P35523 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.2■□□□□ 0.98
CLCN1P35523 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN1P35523 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN1P35523 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.19■□□□□ 0.98
CLCN1P35523 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN1P35523 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN1P35523 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.19■□□□□ 0.98
CLCN1P35523 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CLCN1P35523 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN1P35523 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.19■□□□□ 0.98
CLCN1P35523 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.19■□□□□ 0.98
CLCN1P35523 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.19■□□□□ 0.98
CLCN1P35523 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.19■□□□□ 0.98
CLCN1P35523 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.19■□□□□ 0.98
CLCN1P35523 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.19■□□□□ 0.98
CLCN1P35523 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CLCN1P35523 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CLCN1P35523 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN1P35523 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.19■□□□□ 0.98
CLCN1P35523 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.19■□□□□ 0.98
CLCN1P35523 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN1P35523 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCN1P35523 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN1P35523 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.18■□□□□ 0.98
CLCN1P35523 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN1P35523 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms