Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CKS2P33552 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.73□□□□□ -0.21
CKS2P33552 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
CKS2P33552 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.73□□□□□ -0.21
CKS2P33552 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.73□□□□□ -0.21
CKS2P33552 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CKS2P33552 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CKS2P33552 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 SUDS3P1-201ENST00000505831 966 ntBASIC13.73□□□□□ -0.21
CKS2P33552 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.73□□□□□ -0.21
CKS2P33552 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.73□□□□□ -0.21
CKS2P33552 CYP2T3P-201ENST00000601990 817 ntBASIC13.73□□□□□ -0.21
CKS2P33552 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CKS2P33552 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
CKS2P33552 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.73□□□□□ -0.21
CKS2P33552 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.73□□□□□ -0.21
CKS2P33552 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.73□□□□□ -0.21
CKS2P33552 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CKS2P33552 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS2P33552 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.72□□□□□ -0.21
CKS2P33552 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CKS2P33552 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.72□□□□□ -0.21
CKS2P33552 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.72□□□□□ -0.21
CKS2P33552 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.72□□□□□ -0.21
CKS2P33552 KRT18P14-201ENST00000534205 1250 ntBASIC13.72□□□□□ -0.21
CKS2P33552 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.72□□□□□ -0.21
CKS2P33552 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.72□□□□□ -0.21
CKS2P33552 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.72□□□□□ -0.21
CKS2P33552 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.72□□□□□ -0.21
CKS2P33552 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 AL589743.5-201ENST00000616611 1050 ntBASIC13.72□□□□□ -0.21
CKS2P33552 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.72□□□□□ -0.21
CKS2P33552 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.72□□□□□ -0.21
CKS2P33552 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CKS2P33552 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.72□□□□□ -0.21
CKS2P33552 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.72□□□□□ -0.21
CKS2P33552 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CKS2P33552 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS2P33552 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CKS2P33552 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CKS2P33552 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CKS2P33552 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.71□□□□□ -0.21
CKS2P33552 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms