Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD40P25942 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD40P25942 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.08■□□□□ 0.16
CD40P25942 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.08■□□□□ 0.16
CD40P25942 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CD40P25942 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.08■□□□□ 0.16
CD40P25942 AC010240.3-201ENST00000607688 395 ntBASIC16.08■□□□□ 0.16
CD40P25942 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.08■□□□□ 0.16
CD40P25942 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.08■□□□□ 0.16
CD40P25942 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.08■□□□□ 0.16
CD40P25942 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.08■□□□□ 0.16
CD40P25942 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.08■□□□□ 0.16
CD40P25942 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD40P25942 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.08■□□□□ 0.16
CD40P25942 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD40P25942 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD40P25942 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD40P25942 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD40P25942 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD40P25942 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.08■□□□□ 0.16
CD40P25942 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CD40P25942 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CD40P25942 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CD40P25942 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD40P25942 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.07■□□□□ 0.16
CD40P25942 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.07■□□□□ 0.16
CD40P25942 AL049812.1-201ENST00000432563 2267 ntBASIC16.07■□□□□ 0.16
CD40P25942 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CD40P25942 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CD40P25942 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.07■□□□□ 0.16
CD40P25942 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CD40P25942 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CD40P25942 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CD40P25942 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.07■□□□□ 0.16
CD40P25942 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.07■□□□□ 0.16
CD40P25942 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.07■□□□□ 0.16
CD40P25942 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.07■□□□□ 0.16
CD40P25942 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.07■□□□□ 0.16
CD40P25942 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.07■□□□□ 0.16
CD40P25942 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.07■□□□□ 0.16
CD40P25942 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.07■□□□□ 0.16
CD40P25942 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD40P25942 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CD40P25942 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD40P25942 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.06■□□□□ 0.16
CD40P25942 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD40P25942 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD40P25942 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD40P25942 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.06■□□□□ 0.16
CD40P25942 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CD40P25942 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD40P25942 AL357033.4-201ENST00000617703 1807 ntBASIC16.06■□□□□ 0.16
CD40P25942 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CD40P25942 Z98044.1-201ENST00000632503 1764 ntBASIC16.06■□□□□ 0.16
CD40P25942 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CD40P25942 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.06■□□□□ 0.16
CD40P25942 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD40P25942 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.06■□□□□ 0.16
CD40P25942 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD40P25942 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.06■□□□□ 0.16
CD40P25942 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.06■□□□□ 0.16
CD40P25942 SPDYE13P-201ENST00000445314 798 ntBASIC16.06■□□□□ 0.16
CD40P25942 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD40P25942 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.06■□□□□ 0.16
CD40P25942 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.06■□□□□ 0.16
CD40P25942 AC083906.6-201ENST00000641366 219 ntBASIC16.06■□□□□ 0.16
CD40P25942 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD40P25942 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
CD40P25942 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD40P25942 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.06■□□□□ 0.16
CD40P25942 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.06■□□□□ 0.16
CD40P25942 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD40P25942 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.05■□□□□ 0.16
CD40P25942 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD40P25942 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.05■□□□□ 0.16
CD40P25942 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CD40P25942 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD40P25942 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.05■□□□□ 0.16
CD40P25942 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD40P25942 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD40P25942 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD40P25942 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD40P25942 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.05■□□□□ 0.16
CD40P25942 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD40P25942 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms