Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO1P25800 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO1P25800 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO1P25800 MIR718-201ENST00000390190 70 ntBASIC15.67■□□□□ 0.1
LMO1P25800 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LMO1P25800 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.67■□□□□ 0.1
LMO1P25800 AC008550.1-201ENST00000511500 884 ntBASIC15.67■□□□□ 0.1
LMO1P25800 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.67■□□□□ 0.1
LMO1P25800 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO1P25800 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO1P25800 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.67■□□□□ 0.1
LMO1P25800 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.67■□□□□ 0.1
LMO1P25800 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.67■□□□□ 0.1
LMO1P25800 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO1P25800 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO1P25800 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LMO1P25800 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO1P25800 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LMO1P25800 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LMO1P25800 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.67■□□□□ 0.1
LMO1P25800 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO1P25800 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO1P25800 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO1P25800 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO1P25800 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO1P25800 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LMO1P25800 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LMO1P25800 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.66■□□□□ 0.1
LMO1P25800 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LMO1P25800 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.66■□□□□ 0.1
LMO1P25800 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.66■□□□□ 0.1
LMO1P25800 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.66■□□□□ 0.1
LMO1P25800 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.66■□□□□ 0.1
LMO1P25800 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.66■□□□□ 0.1
LMO1P25800 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.66■□□□□ 0.1
LMO1P25800 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.66■□□□□ 0.1
LMO1P25800 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.66■□□□□ 0.1
LMO1P25800 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 KRT18P41-201ENST00000518924 1277 ntBASIC15.66■□□□□ 0.1
LMO1P25800 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.66■□□□□ 0.1
LMO1P25800 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.66■□□□□ 0.1
LMO1P25800 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.66■□□□□ 0.1
LMO1P25800 AP005242.2-201ENST00000580065 1175 ntBASIC15.66■□□□□ 0.1
LMO1P25800 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
LMO1P25800 AC008622.2-201ENST00000617006 1229 ntBASIC15.66■□□□□ 0.1
LMO1P25800 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.66■□□□□ 0.1
LMO1P25800 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
LMO1P25800 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LMO1P25800 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.66■□□□□ 0.1
LMO1P25800 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LMO1P25800 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
LMO1P25800 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LMO1P25800 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LMO1P25800 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LMO1P25800 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 FZD10-202ENST00000539839 3282 ntBASIC15.65■□□□□ 0.1
LMO1P25800 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.65■□□□□ 0.1
LMO1P25800 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
LMO1P25800 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
LMO1P25800 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
LMO1P25800 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.65■□□□□ 0.1
LMO1P25800 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.65■□□□□ 0.1
LMO1P25800 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.65■□□□□ 0.1
LMO1P25800 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.65■□□□□ 0.1
LMO1P25800 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.65■□□□□ 0.1
LMO1P25800 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.65■□□□□ 0.1
LMO1P25800 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
LMO1P25800 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LMO1P25800 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.65■□□□□ 0.1
LMO1P25800 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO1P25800 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.64■□□□□ 0.1
LMO1P25800 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LMO1P25800 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.64■□□□□ 0.09
LMO1P25800 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms