Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP8P22894 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP8P22894 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
MMP8P22894 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MMP8P22894 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP8P22894 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP8P22894 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP8P22894 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.61■□□□□ 0.73
MMP8P22894 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP8P22894 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP8P22894 NAPSB-206ENST00000562112 1266 ntBASIC19.61■□□□□ 0.73
MMP8P22894 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.61■□□□□ 0.73
MMP8P22894 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP8P22894 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP8P22894 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
MMP8P22894 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MMP8P22894 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MMP8P22894 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP8P22894 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.6■□□□□ 0.73
MMP8P22894 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MMP8P22894 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP8P22894 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP8P22894 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP8P22894 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP8P22894 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP8P22894 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
MMP8P22894 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP8P22894 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.6■□□□□ 0.73
MMP8P22894 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.6■□□□□ 0.73
MMP8P22894 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.6■□□□□ 0.73
MMP8P22894 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.6■□□□□ 0.73
MMP8P22894 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP8P22894 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
MMP8P22894 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.6■□□□□ 0.73
MMP8P22894 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP8P22894 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MMP8P22894 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP8P22894 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP8P22894 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP8P22894 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MMP8P22894 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
MMP8P22894 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
MMP8P22894 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP8P22894 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
MMP8P22894 HOXB1-202ENST00000577092 1414 ntBASIC19.59■□□□□ 0.73
MMP8P22894 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.59■□□□□ 0.73
MMP8P22894 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP8P22894 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
MMP8P22894 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.59■□□□□ 0.73
MMP8P22894 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.59■□□□□ 0.73
MMP8P22894 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.59■□□□□ 0.73
MMP8P22894 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
MMP8P22894 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.59■□□□□ 0.73
MMP8P22894 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
MMP8P22894 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.59■□□□□ 0.73
MMP8P22894 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.59■□□□□ 0.73
MMP8P22894 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.59■□□□□ 0.73
MMP8P22894 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP8P22894 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.58■□□□□ 0.73
MMP8P22894 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MMP8P22894 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MMP8P22894 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MMP8P22894 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
MMP8P22894 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
MMP8P22894 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MMP8P22894 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
MMP8P22894 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP8P22894 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.58■□□□□ 0.72
MMP8P22894 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP8P22894 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP8P22894 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP8P22894 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
MMP8P22894 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.58■□□□□ 0.72
MMP8P22894 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP8P22894 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP8P22894 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP8P22894 AL354751.1-201ENST00000412768 1863 ntBASIC19.58■□□□□ 0.72
MMP8P22894 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
MMP8P22894 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.58■□□□□ 0.72
MMP8P22894 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.58■□□□□ 0.72
MMP8P22894 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms