Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.97■□□□□ 0.63
NFKB1P19838 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NFKB1P19838 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NFKB1P19838 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NFKB1P19838 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NFKB1P19838 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NFKB1P19838 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
NFKB1P19838 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NFKB1P19838 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NFKB1P19838 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NFKB1P19838 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NFKB1P19838 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.97■□□□□ 0.63
NFKB1P19838 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.97■□□□□ 0.63
NFKB1P19838 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.97■□□□□ 0.63
NFKB1P19838 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NFKB1P19838 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NFKB1P19838 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.97■□□□□ 0.63
NFKB1P19838 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
NFKB1P19838 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.97■□□□□ 0.63
NFKB1P19838 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.97■□□□□ 0.63
NFKB1P19838 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.97■□□□□ 0.63
NFKB1P19838 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.97■□□□□ 0.63
NFKB1P19838 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.97■□□□□ 0.63
NFKB1P19838 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.97■□□□□ 0.63
NFKB1P19838 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
NFKB1P19838 AC073592.3-201ENST00000625118 1834 ntBASIC18.97■□□□□ 0.63
NFKB1P19838 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
NFKB1P19838 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.97■□□□□ 0.63
NFKB1P19838 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
NFKB1P19838 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NFKB1P19838 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NFKB1P19838 AC138932.1-201ENST00000534164 6830 ntBASIC18.97■□□□□ 0.63
NFKB1P19838 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NFKB1P19838 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NFKB1P19838 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NFKB1P19838 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NFKB1P19838 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NFKB1P19838 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.96■□□□□ 0.63
NFKB1P19838 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NFKB1P19838 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NFKB1P19838 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NFKB1P19838 MIR564-202ENST00000385049 94 ntBASIC18.96■□□□□ 0.63
NFKB1P19838 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.96■□□□□ 0.63
NFKB1P19838 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.96■□□□□ 0.63
NFKB1P19838 TSPY17P-201ENST00000450329 467 ntBASIC18.96■□□□□ 0.63
NFKB1P19838 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NFKB1P19838 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.96■□□□□ 0.63
NFKB1P19838 C2orf69P3-201ENST00000565542 1120 ntBASIC18.96■□□□□ 0.63
NFKB1P19838 AL353719.1-201ENST00000566847 864 ntBASIC18.96■□□□□ 0.63
NFKB1P19838 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.96■□□□□ 0.63
NFKB1P19838 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NFKB1P19838 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NFKB1P19838 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NFKB1P19838 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NFKB1P19838 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.96■□□□□ 0.63
NFKB1P19838 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NFKB1P19838 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.96■□□□□ 0.63
NFKB1P19838 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.95■□□□□ 0.62
NFKB1P19838 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NFKB1P19838 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 AC036111.1-201ENST00000533973 1582 ntBASIC18.95■□□□□ 0.62
NFKB1P19838 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.95■□□□□ 0.62
NFKB1P19838 AC112777.1-201ENST00000540175 1423 ntBASIC18.95■□□□□ 0.62
NFKB1P19838 AC092338.2-201ENST00000568827 1415 ntBASIC18.95■□□□□ 0.62
NFKB1P19838 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.95■□□□□ 0.62
NFKB1P19838 CCR12P-201ENST00000446203 998 ntBASIC18.95■□□□□ 0.62
NFKB1P19838 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 MIR3180-5-201ENST00000583743 153 ntBASIC18.95■□□□□ 0.62
NFKB1P19838 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.95■□□□□ 0.62
NFKB1P19838 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 CYP2D8P-201ENST00000433633 1490 ntBASIC18.95■□□□□ 0.62
NFKB1P19838 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NFKB1P19838 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NFKB1P19838 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NFKB1P19838 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NFKB1P19838 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.94■□□□□ 0.62
NFKB1P19838 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.94■□□□□ 0.62
NFKB1P19838 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NFKB1P19838 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NFKB1P19838 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.94■□□□□ 0.62
NFKB1P19838 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.94■□□□□ 0.62
NFKB1P19838 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NFKB1P19838 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NFKB1P19838 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NFKB1P19838 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.94■□□□□ 0.62
NFKB1P19838 MYC-208ENST00000641036 567 ntBASIC18.94■□□□□ 0.62
NFKB1P19838 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NFKB1P19838 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NFKB1P19838 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms