Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNB1P11230 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNB1P11230 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CHRNB1P11230 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNB1P11230 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNB1P11230 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.89■□□□□ 0.61
CHRNB1P11230 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNB1P11230 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CHRNB1P11230 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNB1P11230 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHRNB1P11230 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHRNB1P11230 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CHRNB1P11230 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNB1P11230 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNB1P11230 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CHRNB1P11230 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNB1P11230 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHRNB1P11230 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.88■□□□□ 0.61
CHRNB1P11230 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.88■□□□□ 0.61
CHRNB1P11230 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.88■□□□□ 0.61
CHRNB1P11230 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNB1P11230 AL671883.3-201ENST00000603274 991 ntBASIC18.88■□□□□ 0.61
CHRNB1P11230 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.88■□□□□ 0.61
CHRNB1P11230 BX640515.1-201ENST00000617215 977 ntBASIC18.88■□□□□ 0.61
CHRNB1P11230 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CHRNB1P11230 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.88■□□□□ 0.61
CHRNB1P11230 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNB1P11230 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNB1P11230 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNB1P11230 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNB1P11230 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.88■□□□□ 0.61
CHRNB1P11230 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.88■□□□□ 0.61
CHRNB1P11230 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHRNB1P11230 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNB1P11230 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNB1P11230 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNB1P11230 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNB1P11230 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNB1P11230 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNB1P11230 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNB1P11230 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNB1P11230 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNB1P11230 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CHRNB1P11230 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.87■□□□□ 0.61
CHRNB1P11230 RN7SL606P-201ENST00000472779 293 ntBASIC18.87■□□□□ 0.61
CHRNB1P11230 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.87■□□□□ 0.61
CHRNB1P11230 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNB1P11230 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.87■□□□□ 0.61
CHRNB1P11230 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.87■□□□□ 0.61
CHRNB1P11230 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.87■□□□□ 0.61
CHRNB1P11230 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.87■□□□□ 0.61
CHRNB1P11230 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHRNB1P11230 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.87■□□□□ 0.61
CHRNB1P11230 AL158211.5-201ENST00000623583 2518 ntBASIC18.87■□□□□ 0.61
CHRNB1P11230 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHRNB1P11230 LINC01006-201ENST00000333319 2292 ntBASIC18.86■□□□□ 0.61
CHRNB1P11230 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNB1P11230 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.86■□□□□ 0.61
CHRNB1P11230 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.86■□□□□ 0.61
CHRNB1P11230 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.86■□□□□ 0.61
CHRNB1P11230 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CHRNB1P11230 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 IGHGP-201ENST00000390555 1178 ntBASIC18.86■□□□□ 0.61
CHRNB1P11230 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 AP000593.1-201ENST00000393668 712 ntBASIC18.86■□□□□ 0.61
CHRNB1P11230 TSPY12P-201ENST00000421279 868 ntBASIC18.86■□□□□ 0.61
CHRNB1P11230 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHRNB1P11230 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CHRNB1P11230 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CHRNB1P11230 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.86■□□□□ 0.61
CHRNB1P11230 MIR3180-4-201ENST00000582223 153 ntBASIC18.86■□□□□ 0.61
CHRNB1P11230 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.86■□□□□ 0.61
CHRNB1P11230 AC120114.3-201ENST00000611923 658 ntBASIC18.86■□□□□ 0.61
CHRNB1P11230 AL592071.1-201ENST00000611956 408 ntBASIC18.86■□□□□ 0.61
CHRNB1P11230 AC124864.1-201ENST00000623408 392 ntBASIC18.86■□□□□ 0.61
CHRNB1P11230 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms