Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ERCC1P07992 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC1P07992 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.55■□□□□ 0.24
ERCC1P07992 NAPSB-206ENST00000562112 1266 ntBASIC16.55■□□□□ 0.24
ERCC1P07992 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
ERCC1P07992 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.55■□□□□ 0.24
ERCC1P07992 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
ERCC1P07992 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC1P07992 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC1P07992 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ERCC1P07992 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC1P07992 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 FEM1AP3-201ENST00000403722 1741 ntBASIC16.54■□□□□ 0.24
ERCC1P07992 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC1P07992 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.54■□□□□ 0.24
ERCC1P07992 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ERCC1P07992 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC1P07992 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ERCC1P07992 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.54■□□□□ 0.24
ERCC1P07992 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ERCC1P07992 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC1P07992 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ERCC1P07992 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC1P07992 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC1P07992 WIZP1-201ENST00000531444 2299 ntBASIC16.53■□□□□ 0.24
ERCC1P07992 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ERCC1P07992 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ERCC1P07992 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC1P07992 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ERCC1P07992 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 AC005332.8-201ENST00000622750 2735 ntBASIC16.53■□□□□ 0.24
ERCC1P07992 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ERCC1P07992 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC1P07992 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 C2orf69P3-201ENST00000565542 1120 ntBASIC16.53■□□□□ 0.24
ERCC1P07992 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC1P07992 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.53■□□□□ 0.24
ERCC1P07992 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.53■□□□□ 0.24
ERCC1P07992 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC1P07992 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 AP000525.1-201ENST00000608286 694 ntBASIC16.53■□□□□ 0.24
ERCC1P07992 MIR6786-201ENST00000616843 113 ntBASIC16.53■□□□□ 0.24
ERCC1P07992 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ERCC1P07992 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC1P07992 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ERCC1P07992 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
ERCC1P07992 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ERCC1P07992 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ERCC1P07992 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ERCC1P07992 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC1P07992 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC1P07992 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC1P07992 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
ERCC1P07992 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ERCC1P07992 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC1P07992 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
ERCC1P07992 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC1P07992 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC1P07992 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.52■□□□□ 0.24
ERCC1P07992 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms