Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
HLA-DRAP01903 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.03■□□□□ 0.8
HLA-DRAP01903 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HLA-DRAP01903 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.03■□□□□ 0.8
HLA-DRAP01903 AC113347.1-201ENST00000413321 391 ntBASIC20.03■□□□□ 0.8
HLA-DRAP01903 KRT18P23-201ENST00000435622 1283 ntBASIC20.03■□□□□ 0.8
HLA-DRAP01903 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DRAP01903 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.03■□□□□ 0.8
HLA-DRAP01903 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.03■□□□□ 0.8
HLA-DRAP01903 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DRAP01903 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DRAP01903 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DRAP01903 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRAP01903 KRT8P50-201ENST00000562022 1438 ntBASIC20.02■□□□□ 0.8
HLA-DRAP01903 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.02■□□□□ 0.8
HLA-DRAP01903 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-DRAP01903 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRAP01903 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRAP01903 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRAP01903 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRAP01903 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRAP01903 TERF1P1-201ENST00000311003 1181 ntBASIC20.02■□□□□ 0.8
HLA-DRAP01903 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.02■□□□□ 0.8
HLA-DRAP01903 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.02■□□□□ 0.8
HLA-DRAP01903 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.02■□□□□ 0.8
HLA-DRAP01903 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.02■□□□□ 0.8
HLA-DRAP01903 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-DRAP01903 AC141257.4-201ENST00000634557 245 ntBASIC20.02■□□□□ 0.8
HLA-DRAP01903 AC136944.6-201ENST00000634818 245 ntBASIC20.02■□□□□ 0.8
HLA-DRAP01903 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRAP01903 MYC-208ENST00000641036 567 ntBASIC20.02■□□□□ 0.8
HLA-DRAP01903 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRAP01903 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRAP01903 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HLA-DRAP01903 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRAP01903 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HLA-DRAP01903 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DRAP01903 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DRAP01903 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DRAP01903 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.02■□□□□ 0.79
HLA-DRAP01903 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DRAP01903 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DRAP01903 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DRAP01903 HOXB1-202ENST00000577092 1414 ntBASIC20.02■□□□□ 0.79
HLA-DRAP01903 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DRAP01903 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.02■□□□□ 0.79
HLA-DRAP01903 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 AC005082.1-201ENST00000413042 2259 ntBASIC20.01■□□□□ 0.79
HLA-DRAP01903 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 AC005521.1-201ENST00000393351 872 ntBASIC20.01■□□□□ 0.79
HLA-DRAP01903 LIN28AP1-201ENST00000429574 405 ntBASIC20.01■□□□□ 0.79
HLA-DRAP01903 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DRAP01903 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HLA-DRAP01903 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms