Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFNB1P01574 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFNB1P01574 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
IFNB1P01574 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFNB1P01574 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
IFNB1P01574 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.33■□□□□ 0.68
IFNB1P01574 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
IFNB1P01574 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFNB1P01574 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.33■□□□□ 0.68
IFNB1P01574 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
IFNB1P01574 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
IFNB1P01574 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.32■□□□□ 0.68
IFNB1P01574 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.32■□□□□ 0.68
IFNB1P01574 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.32■□□□□ 0.68
IFNB1P01574 AC073592.3-201ENST00000625118 1834 ntBASIC19.32■□□□□ 0.68
IFNB1P01574 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.32■□□□□ 0.68
IFNB1P01574 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFNB1P01574 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.32■□□□□ 0.68
IFNB1P01574 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
IFNB1P01574 MTMR9LP-203ENST00000426597 1545 ntBASIC19.32■□□□□ 0.68
IFNB1P01574 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
IFNB1P01574 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFNB1P01574 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFNB1P01574 AC091390.4-202ENST00000476426 537 ntBASIC19.32■□□□□ 0.68
IFNB1P01574 PRSS44-201ENST00000515154 1146 ntBASIC19.32■□□□□ 0.68
IFNB1P01574 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.32■□□□□ 0.68
IFNB1P01574 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
IFNB1P01574 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFNB1P01574 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFNB1P01574 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
IFNB1P01574 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IFNB1P01574 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFNB1P01574 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.32■□□□□ 0.68
IFNB1P01574 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFNB1P01574 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFNB1P01574 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFNB1P01574 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IFNB1P01574 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
IFNB1P01574 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.31■□□□□ 0.68
IFNB1P01574 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
IFNB1P01574 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.31■□□□□ 0.68
IFNB1P01574 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.31■□□□□ 0.68
IFNB1P01574 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.31■□□□□ 0.68
IFNB1P01574 KSR1P1-201ENST00000446298 240 ntBASIC19.31■□□□□ 0.68
IFNB1P01574 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
IFNB1P01574 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.31■□□□□ 0.68
IFNB1P01574 CD99P1-205ENST00000527459 561 ntBASIC19.31■□□□□ 0.68
IFNB1P01574 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.31■□□□□ 0.68
IFNB1P01574 MIR4651-201ENST00000582622 73 ntBASIC19.31■□□□□ 0.68
IFNB1P01574 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.31■□□□□ 0.68
IFNB1P01574 AC068587.9-201ENST00000641814 219 ntBASIC19.31■□□□□ 0.68
IFNB1P01574 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.31■□□□□ 0.68
IFNB1P01574 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
IFNB1P01574 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.31■□□□□ 0.68
IFNB1P01574 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFNB1P01574 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.3■□□□□ 0.68
IFNB1P01574 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
IFNB1P01574 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
IFNB1P01574 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
IFNB1P01574 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.3■□□□□ 0.68
IFNB1P01574 AC004951.3-201ENST00000418645 1148 ntBASIC19.3■□□□□ 0.68
IFNB1P01574 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.3■□□□□ 0.68
IFNB1P01574 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.3■□□□□ 0.68
IFNB1P01574 AL353708.3-201ENST00000610272 989 ntBASIC19.3■□□□□ 0.68
IFNB1P01574 CR392000.1-201ENST00000624770 1228 ntBASIC19.3■□□□□ 0.68
IFNB1P01574 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.3■□□□□ 0.68
IFNB1P01574 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
IFNB1P01574 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
IFNB1P01574 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
IFNB1P01574 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
IFNB1P01574 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFNB1P01574 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms