Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.25■□□□□ 0.99
ALDH1A1P00352 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A1P00352 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.25■□□□□ 0.99
ALDH1A1P00352 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.25■□□□□ 0.99
ALDH1A1P00352 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.25■□□□□ 0.99
ALDH1A1P00352 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.25■□□□□ 0.99
ALDH1A1P00352 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A1P00352 Z83851.2-201ENST00000609564 659 ntBASIC21.25■□□□□ 0.99
ALDH1A1P00352 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ALDH1A1P00352 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A1P00352 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ALDH1A1P00352 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A1P00352 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
ALDH1A1P00352 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A1P00352 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALDH1A1P00352 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.24■□□□□ 0.99
ALDH1A1P00352 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.24■□□□□ 0.99
ALDH1A1P00352 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
ALDH1A1P00352 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.24■□□□□ 0.99
ALDH1A1P00352 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALDH1A1P00352 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.24■□□□□ 0.99
ALDH1A1P00352 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ALDH1A1P00352 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ALDH1A1P00352 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
ALDH1A1P00352 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ALDH1A1P00352 AC012676.1-201ENST00000574705 1949 ntBASIC21.23■□□□□ 0.99
ALDH1A1P00352 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ALDH1A1P00352 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.23■□□□□ 0.99
ALDH1A1P00352 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.23■□□□□ 0.99
ALDH1A1P00352 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.23■□□□□ 0.99
ALDH1A1P00352 AC009533.2-201ENST00000543664 586 ntBASIC21.23■□□□□ 0.99
ALDH1A1P00352 AC021087.4-201ENST00000563761 564 ntBASIC21.23■□□□□ 0.99
ALDH1A1P00352 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
ALDH1A1P00352 AP001269.4-201ENST00000609611 512 ntBASIC21.23■□□□□ 0.99
ALDH1A1P00352 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.23■□□□□ 0.99
ALDH1A1P00352 AC134684.3-201ENST00000641758 218 ntBASIC21.23■□□□□ 0.99
ALDH1A1P00352 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
ALDH1A1P00352 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ALDH1A1P00352 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ALDH1A1P00352 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ALDH1A1P00352 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ALDH1A1P00352 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.23■□□□□ 0.99
ALDH1A1P00352 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ALDH1A1P00352 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ALDH1A1P00352 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.22■□□□□ 0.99
ALDH1A1P00352 AC112777.1-201ENST00000540175 1423 ntBASIC21.22■□□□□ 0.99
ALDH1A1P00352 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ALDH1A1P00352 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ALDH1A1P00352 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ALDH1A1P00352 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ALDH1A1P00352 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.22■□□□□ 0.99
ALDH1A1P00352 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.22■□□□□ 0.99
ALDH1A1P00352 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ALDH1A1P00352 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.22■□□□□ 0.99
ALDH1A1P00352 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.22■□□□□ 0.99
ALDH1A1P00352 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.22■□□□□ 0.99
ALDH1A1P00352 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ALDH1A1P00352 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ALDH1A1P00352 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ALDH1A1P00352 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ALDH1A1P00352 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ALDH1A1P00352 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALDH1A1P00352 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ALDH1A1P00352 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.21■□□□□ 0.99
ALDH1A1P00352 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
ALDH1A1P00352 AC092910.1-201ENST00000482027 1129 ntBASIC21.21■□□□□ 0.99
ALDH1A1P00352 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.21■□□□□ 0.99
ALDH1A1P00352 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.21■□□□□ 0.99
ALDH1A1P00352 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ALDH1A1P00352 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ALDH1A1P00352 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.21■□□□□ 0.99
ALDH1A1P00352 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ALDH1A1P00352 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALDH1A1P00352 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ALDH1A1P00352 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
ALDH1A1P00352 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms