Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.57■□□□□ 0.24
CNOT4O95628 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 MIR3180-5-201ENST00000583743 153 ntBASIC16.57■□□□□ 0.24
CNOT4O95628 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.57■□□□□ 0.24
CNOT4O95628 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CNOT4O95628 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CNOT4O95628 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.57■□□□□ 0.24
CNOT4O95628 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CNOT4O95628 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.57■□□□□ 0.24
CNOT4O95628 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CNOT4O95628 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 AC005332.7-201ENST00000614046 2005 ntBASIC16.57■□□□□ 0.24
CNOT4O95628 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNOT4O95628 BX323043.1-201ENST00000641006 1765 ntBASIC16.56■□□□□ 0.24
CNOT4O95628 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.56■□□□□ 0.24
CNOT4O95628 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 GPAT2P1-201ENST00000444924 1672 ntBASIC16.56■□□□□ 0.24
CNOT4O95628 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CNOT4O95628 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.56■□□□□ 0.24
CNOT4O95628 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 KRT8P32-201ENST00000512863 1461 ntBASIC16.56■□□□□ 0.24
CNOT4O95628 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.56■□□□□ 0.24
CNOT4O95628 KRT8P7-201ENST00000533003 1432 ntBASIC16.56■□□□□ 0.24
CNOT4O95628 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CNOT4O95628 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.56■□□□□ 0.24
CNOT4O95628 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CNOT4O95628 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CNOT4O95628 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.56■□□□□ 0.24
CNOT4O95628 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.56■□□□□ 0.24
CNOT4O95628 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.56■□□□□ 0.24
CNOT4O95628 AK4P3-201ENST00000418260 669 ntBASIC16.56■□□□□ 0.24
CNOT4O95628 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CNOT4O95628 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
CNOT4O95628 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.56■□□□□ 0.24
CNOT4O95628 MIR4674-201ENST00000582457 87 ntBASIC16.56■□□□□ 0.24
CNOT4O95628 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.56■□□□□ 0.24
CNOT4O95628 CR769767.2-201ENST00000622735 460 ntBASIC16.56■□□□□ 0.24
CNOT4O95628 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNOT4O95628 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CNOT4O95628 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.55■□□□□ 0.24
CNOT4O95628 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CNOT4O95628 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.55■□□□□ 0.24
CNOT4O95628 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.55■□□□□ 0.24
CNOT4O95628 RNF152P1-201ENST00000397754 604 ntBASIC16.55■□□□□ 0.24
CNOT4O95628 UPK3BP1-201ENST00000428678 509 ntBASIC16.55■□□□□ 0.24
CNOT4O95628 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.55■□□□□ 0.24
CNOT4O95628 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CNOT4O95628 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.55■□□□□ 0.24
CNOT4O95628 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.55■□□□□ 0.24
CNOT4O95628 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.55■□□□□ 0.24
CNOT4O95628 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.55■□□□□ 0.24
CNOT4O95628 AC091076.1-201ENST00000610741 619 ntBASIC16.55■□□□□ 0.24
CNOT4O95628 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CNOT4O95628 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CNOT4O95628 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNOT4O95628 AL020996.1-203ENST00000536896 2307 ntBASIC16.54■□□□□ 0.24
CNOT4O95628 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.54■□□□□ 0.24
CNOT4O95628 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.54■□□□□ 0.24
CNOT4O95628 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.54■□□□□ 0.24
CNOT4O95628 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms