Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.64■□□□□ 0.73
RTN3O95197 AC024243.1-201ENST00000609234 778 ntBASIC19.64■□□□□ 0.73
RTN3O95197 AC068587.9-201ENST00000641814 219 ntBASIC19.64■□□□□ 0.73
RTN3O95197 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN3O95197 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.64■□□□□ 0.73
RTN3O95197 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.64■□□□□ 0.73
RTN3O95197 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN3O95197 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTN3O95197 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN3O95197 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.64■□□□□ 0.73
RTN3O95197 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN3O95197 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTN3O95197 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.64■□□□□ 0.73
RTN3O95197 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN3O95197 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN3O95197 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN3O95197 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RTN3O95197 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN3O95197 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN3O95197 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTN3O95197 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.63■□□□□ 0.73
RTN3O95197 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.63■□□□□ 0.73
RTN3O95197 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
RTN3O95197 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.63■□□□□ 0.73
RTN3O95197 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.63■□□□□ 0.73
RTN3O95197 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
RTN3O95197 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RTN3O95197 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 KRT18P38-201ENST00000449496 1282 ntBASIC19.63■□□□□ 0.73
RTN3O95197 AL671277.2-201ENST00000458060 996 ntBASIC19.63■□□□□ 0.73
RTN3O95197 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.63■□□□□ 0.73
RTN3O95197 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.63■□□□□ 0.73
RTN3O95197 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTN3O95197 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
RTN3O95197 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
RTN3O95197 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN3O95197 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
RTN3O95197 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.62■□□□□ 0.73
RTN3O95197 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.62■□□□□ 0.73
RTN3O95197 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.62■□□□□ 0.73
RTN3O95197 AL161938.1-201ENST00000569833 2180 ntBASIC19.62■□□□□ 0.73
RTN3O95197 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
RTN3O95197 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.62■□□□□ 0.73
RTN3O95197 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.62■□□□□ 0.73
RTN3O95197 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.62■□□□□ 0.73
RTN3O95197 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.62■□□□□ 0.73
RTN3O95197 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.62■□□□□ 0.73
RTN3O95197 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.62■□□□□ 0.73
RTN3O95197 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RTN3O95197 AC020916.1-201ENST00000587762 1774 ntBASIC19.62■□□□□ 0.73
RTN3O95197 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RTN3O95197 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RTN3O95197 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTN3O95197 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN3O95197 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTN3O95197 HOXB1-202ENST00000577092 1414 ntBASIC19.61■□□□□ 0.73
RTN3O95197 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.61■□□□□ 0.73
RTN3O95197 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.61■□□□□ 0.73
RTN3O95197 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RTN3O95197 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.61■□□□□ 0.73
RTN3O95197 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN3O95197 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.61■□□□□ 0.73
RTN3O95197 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN3O95197 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN3O95197 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN3O95197 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RTN3O95197 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.61■□□□□ 0.73
RTN3O95197 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN3O95197 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN3O95197 KRT18P23-201ENST00000435622 1283 ntBASIC19.61■□□□□ 0.73
RTN3O95197 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RTN3O95197 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.61■□□□□ 0.73
RTN3O95197 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RTN3O95197 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RTN3O95197 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.61■□□□□ 0.73
RTN3O95197 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.61■□□□□ 0.73
RTN3O95197 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms