Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
UPK1BO75841 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.27■□□□□ 0.2
UPK1BO75841 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
UPK1BO75841 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UPK1BO75841 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
UPK1BO75841 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
UPK1BO75841 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.27■□□□□ 0.2
UPK1BO75841 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
UPK1BO75841 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.27■□□□□ 0.2
UPK1BO75841 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1BO75841 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.27■□□□□ 0.19
UPK1BO75841 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UPK1BO75841 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UPK1BO75841 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
UPK1BO75841 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UPK1BO75841 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
UPK1BO75841 AC103702.1-201ENST00000548801 2630 ntBASIC16.27■□□□□ 0.19
UPK1BO75841 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UPK1BO75841 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
UPK1BO75841 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UPK1BO75841 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
UPK1BO75841 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.26■□□□□ 0.19
UPK1BO75841 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
UPK1BO75841 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.26■□□□□ 0.19
UPK1BO75841 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
UPK1BO75841 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.26■□□□□ 0.19
UPK1BO75841 DUX4L2-201ENST00000561772 1275 ntBASIC16.26■□□□□ 0.19
UPK1BO75841 CCDC92B-201ENST00000575506 885 ntBASIC16.26■□□□□ 0.19
UPK1BO75841 TPRG1LP1-201ENST00000598702 760 ntBASIC16.26■□□□□ 0.19
UPK1BO75841 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
UPK1BO75841 DUX4L6-201ENST00000626483 1275 ntBASIC16.26■□□□□ 0.19
UPK1BO75841 DUX4L1-201ENST00000627662 1275 ntBASIC16.26■□□□□ 0.19
UPK1BO75841 DUX4L8-201ENST00000629013 1275 ntBASIC16.26■□□□□ 0.19
UPK1BO75841 DUX4L3-201ENST00000630187 1275 ntBASIC16.26■□□□□ 0.19
UPK1BO75841 DUX4L7-201ENST00000630678 1275 ntBASIC16.26■□□□□ 0.19
UPK1BO75841 DUX4L5-201ENST00000630834 1275 ntBASIC16.26■□□□□ 0.19
UPK1BO75841 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
UPK1BO75841 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.26■□□□□ 0.19
UPK1BO75841 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.26■□□□□ 0.19
UPK1BO75841 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 AC105020.1-201ENST00000435356 2205 ntBASIC16.26■□□□□ 0.19
UPK1BO75841 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.26■□□□□ 0.19
UPK1BO75841 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1BO75841 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
UPK1BO75841 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
UPK1BO75841 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.25■□□□□ 0.19
UPK1BO75841 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.25■□□□□ 0.19
UPK1BO75841 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UPK1BO75841 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
UPK1BO75841 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.25■□□□□ 0.19
UPK1BO75841 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.25■□□□□ 0.19
UPK1BO75841 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1BO75841 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
UPK1BO75841 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms