Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CTNSO60931 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNSO60931 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNSO60931 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNSO60931 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTNSO60931 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CTNSO60931 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNSO60931 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CTNSO60931 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CTNSO60931 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CTNSO60931 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CTNSO60931 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTNSO60931 ANO7L1-203ENST00000602586 1720 ntBASIC17.47■□□□□ 0.39
CTNSO60931 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNSO60931 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.47■□□□□ 0.39
CTNSO60931 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.47■□□□□ 0.39
CTNSO60931 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNSO60931 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.47■□□□□ 0.39
CTNSO60931 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.47■□□□□ 0.39
CTNSO60931 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.47■□□□□ 0.39
CTNSO60931 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNSO60931 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNSO60931 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CTNSO60931 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
CTNSO60931 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.47■□□□□ 0.39
CTNSO60931 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.47■□□□□ 0.39
CTNSO60931 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 AC112777.1-201ENST00000540175 1423 ntBASIC17.47■□□□□ 0.39
CTNSO60931 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTNSO60931 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNSO60931 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.46■□□□□ 0.39
CTNSO60931 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNSO60931 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNSO60931 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNSO60931 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.46■□□□□ 0.39
CTNSO60931 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNSO60931 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNSO60931 AP000593.1-201ENST00000393668 712 ntBASIC17.46■□□□□ 0.39
CTNSO60931 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTNSO60931 FAM210CP-201ENST00000445714 574 ntBASIC17.46■□□□□ 0.39
CTNSO60931 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.46■□□□□ 0.39
CTNSO60931 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.46■□□□□ 0.39
CTNSO60931 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNSO60931 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.46■□□□□ 0.39
CTNSO60931 KRT18P21-201ENST00000515767 1272 ntBASIC17.46■□□□□ 0.39
CTNSO60931 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.46■□□□□ 0.39
CTNSO60931 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.46■□□□□ 0.39
CTNSO60931 RN7SL850P-201ENST00000579959 291 ntBASIC17.46■□□□□ 0.39
CTNSO60931 AC139887.4-201ENST00000607877 719 ntBASIC17.46■□□□□ 0.39
CTNSO60931 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTNSO60931 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTNSO60931 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.46■□□□□ 0.39
CTNSO60931 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNSO60931 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTNSO60931 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTNSO60931 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.46■□□□□ 0.39
CTNSO60931 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
CTNSO60931 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
CTNSO60931 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.45■□□□□ 0.38
CTNSO60931 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.45■□□□□ 0.38
CTNSO60931 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.45■□□□□ 0.38
CTNSO60931 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 TMPOP1-202ENST00000424642 1267 ntBASIC17.45■□□□□ 0.38
CTNSO60931 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.45■□□□□ 0.38
CTNSO60931 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.45■□□□□ 0.38
CTNSO60931 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.45■□□□□ 0.38
CTNSO60931 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CTNSO60931 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.45■□□□□ 0.38
CTNSO60931 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CTNSO60931 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.45■□□□□ 0.38
CTNSO60931 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTNSO60931 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CTNSO60931 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CTNSO60931 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.44■□□□□ 0.38
CTNSO60931 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms