Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.21■□□□□ 0.67
TSPAN3O60637 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 LINC01311-201ENST00000565162 1445 ntBASIC19.21■□□□□ 0.67
TSPAN3O60637 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.21■□□□□ 0.67
TSPAN3O60637 AL157888.1-201ENST00000631930 593 ntBASIC19.21■□□□□ 0.67
TSPAN3O60637 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 AC006333.2-201ENST00000607957 2099 ntBASIC19.21■□□□□ 0.67
TSPAN3O60637 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.21■□□□□ 0.67
TSPAN3O60637 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.21■□□□□ 0.67
TSPAN3O60637 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TSPAN3O60637 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.21■□□□□ 0.67
TSPAN3O60637 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.21■□□□□ 0.67
TSPAN3O60637 AL357033.4-201ENST00000617703 1807 ntBASIC19.21■□□□□ 0.67
TSPAN3O60637 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
TSPAN3O60637 HEIH-201ENST00000623091 1652 ntBASIC19.2■□□□□ 0.66
TSPAN3O60637 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN3O60637 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.2■□□□□ 0.66
TSPAN3O60637 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN3O60637 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.2■□□□□ 0.66
TSPAN3O60637 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN3O60637 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN3O60637 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN3O60637 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN3O60637 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN3O60637 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN3O60637 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TSPAN3O60637 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN3O60637 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.2■□□□□ 0.66
TSPAN3O60637 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.2■□□□□ 0.66
TSPAN3O60637 AC034232.1-201ENST00000506026 1064 ntBASIC19.2■□□□□ 0.66
TSPAN3O60637 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TSPAN3O60637 HYMAI.1-201ENST00000620949 238 ntBASIC19.2■□□□□ 0.66
TSPAN3O60637 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TSPAN3O60637 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.2■□□□□ 0.66
TSPAN3O60637 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
TSPAN3O60637 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN3O60637 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TSPAN3O60637 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN3O60637 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
TSPAN3O60637 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TSPAN3O60637 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TSPAN3O60637 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.2■□□□□ 0.66
TSPAN3O60637 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TSPAN3O60637 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.19■□□□□ 0.66
TSPAN3O60637 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TSPAN3O60637 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 AC087289.5-201ENST00000586076 3175 ntBASIC19.19■□□□□ 0.66
TSPAN3O60637 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TSPAN3O60637 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.19■□□□□ 0.66
TSPAN3O60637 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 FAM86EP-206ENST00000510506 987 ntBASIC19.19■□□□□ 0.66
TSPAN3O60637 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.19■□□□□ 0.66
TSPAN3O60637 AC083849.1-201ENST00000615227 514 ntBASIC19.19■□□□□ 0.66
TSPAN3O60637 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.19■□□□□ 0.66
TSPAN3O60637 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.19■□□□□ 0.66
TSPAN3O60637 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.19■□□□□ 0.66
TSPAN3O60637 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TSPAN3O60637 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.19■□□□□ 0.66
TSPAN3O60637 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TSPAN3O60637 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.19■□□□□ 0.66
TSPAN3O60637 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TSPAN3O60637 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TSPAN3O60637 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.18■□□□□ 0.66
TSPAN3O60637 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.18■□□□□ 0.66
TSPAN3O60637 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms