Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.43■□□□□ 0.7
CREB3O43889 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 GPAT2P1-201ENST00000444924 1672 ntBASIC19.43■□□□□ 0.7
CREB3O43889 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.43■□□□□ 0.7
CREB3O43889 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.43■□□□□ 0.7
CREB3O43889 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CREB3O43889 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.43■□□□□ 0.7
CREB3O43889 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.43■□□□□ 0.7
CREB3O43889 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 CCR12P-201ENST00000446203 998 ntBASIC19.43■□□□□ 0.7
CREB3O43889 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.43■□□□□ 0.7
CREB3O43889 AC010947.1-201ENST00000623454 693 ntBASIC19.43■□□□□ 0.7
CREB3O43889 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.43■□□□□ 0.7
CREB3O43889 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.43■□□□□ 0.7
CREB3O43889 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CREB3O43889 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CREB3O43889 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.43■□□□□ 0.7
CREB3O43889 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.43■□□□□ 0.7
CREB3O43889 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CREB3O43889 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.43■□□□□ 0.7
CREB3O43889 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.42■□□□□ 0.7
CREB3O43889 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.42■□□□□ 0.7
CREB3O43889 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 AL031598.1-201ENST00000561511 1773 ntBASIC19.42■□□□□ 0.7
CREB3O43889 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.42■□□□□ 0.7
CREB3O43889 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.42■□□□□ 0.7
CREB3O43889 TSPY17P-201ENST00000450329 467 ntBASIC19.42■□□□□ 0.7
CREB3O43889 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.42■□□□□ 0.7
CREB3O43889 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.42■□□□□ 0.7
CREB3O43889 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.42■□□□□ 0.7
CREB3O43889 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.42■□□□□ 0.7
CREB3O43889 AP003041.3-201ENST00000527151 707 ntBASIC19.42■□□□□ 0.7
CREB3O43889 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.42■□□□□ 0.7
CREB3O43889 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 AL023803.3-201ENST00000615559 522 ntBASIC19.42■□□□□ 0.7
CREB3O43889 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.42■□□□□ 0.7
CREB3O43889 AC116562.4-202ENST00000641738 218 ntBASIC19.42■□□□□ 0.7
CREB3O43889 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.42■□□□□ 0.7
CREB3O43889 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.42■□□□□ 0.7
CREB3O43889 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CREB3O43889 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.42■□□□□ 0.7
CREB3O43889 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
CREB3O43889 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.42■□□□□ 0.7
CREB3O43889 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CREB3O43889 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CREB3O43889 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CREB3O43889 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CREB3O43889 AC008556.1-201ENST00000610908 2040 ntBASIC19.41■□□□□ 0.7
CREB3O43889 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CREB3O43889 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.41■□□□□ 0.7
CREB3O43889 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.41■□□□□ 0.7
CREB3O43889 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CREB3O43889 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CREB3O43889 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.41■□□□□ 0.7
CREB3O43889 INGX-201ENST00000359239 846 ntBASIC19.41■□□□□ 0.7
CREB3O43889 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CREB3O43889 AL023284.2-201ENST00000405850 579 ntBASIC19.41■□□□□ 0.7
CREB3O43889 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
CREB3O43889 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.41■□□□□ 0.7
CREB3O43889 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.41■□□□□ 0.7
CREB3O43889 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.41■□□□□ 0.7
CREB3O43889 AL353719.1-201ENST00000566847 864 ntBASIC19.41■□□□□ 0.7
CREB3O43889 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.41■□□□□ 0.7
CREB3O43889 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.41■□□□□ 0.7
CREB3O43889 Z98044.1-201ENST00000632503 1764 ntBASIC19.41■□□□□ 0.7
CREB3O43889 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CREB3O43889 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.41■□□□□ 0.7
CREB3O43889 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
CREB3O43889 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CREB3O43889 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms