Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17■□□□□ 0.31
RNF13O43567 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17■□□□□ 0.31
RNF13O43567 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNF13O43567 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17■□□□□ 0.31
RNF13O43567 AC091390.4-202ENST00000476426 537 ntBASIC17■□□□□ 0.31
RNF13O43567 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RNF13O43567 PRSS44-201ENST00000515154 1146 ntBASIC17■□□□□ 0.31
RNF13O43567 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17■□□□□ 0.31
RNF13O43567 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNF13O43567 AC026271.3-201ENST00000571884 352 ntBASIC17■□□□□ 0.31
RNF13O43567 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RNF13O43567 AC011298.2-201ENST00000617989 482 ntBASIC17■□□□□ 0.31
RNF13O43567 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17■□□□□ 0.31
RNF13O43567 AC083906.6-201ENST00000641366 219 ntBASIC17■□□□□ 0.31
RNF13O43567 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17■□□□□ 0.31
RNF13O43567 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
RNF13O43567 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17■□□□□ 0.31
RNF13O43567 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17■□□□□ 0.31
RNF13O43567 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17■□□□□ 0.31
RNF13O43567 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17■□□□□ 0.31
RNF13O43567 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17■□□□□ 0.31
RNF13O43567 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17■□□□□ 0.31
RNF13O43567 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RNF13O43567 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
RNF13O43567 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF13O43567 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF13O43567 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF13O43567 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RNF13O43567 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF13O43567 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF13O43567 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 LTB4R2-202ENST00000528054 3092 ntBASIC16.99■□□□□ 0.31
RNF13O43567 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RNF13O43567 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF13O43567 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF13O43567 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.99■□□□□ 0.31
RNF13O43567 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
RNF13O43567 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF13O43567 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 AC068880.1-201ENST00000507289 2297 ntBASIC16.98■□□□□ 0.31
RNF13O43567 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF13O43567 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF13O43567 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RNF13O43567 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
RNF13O43567 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RNF13O43567 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF13O43567 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF13O43567 FAM197Y1-201ENST00000421178 764 ntBASIC16.98■□□□□ 0.31
RNF13O43567 UBE2SP1-201ENST00000450587 669 ntBASIC16.98■□□□□ 0.31
RNF13O43567 AC098590.1-201ENST00000468126 897 ntBASIC16.98■□□□□ 0.31
RNF13O43567 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF13O43567 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.98■□□□□ 0.31
RNF13O43567 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.98■□□□□ 0.31
RNF13O43567 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF13O43567 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF13O43567 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF13O43567 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF13O43567 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF13O43567 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF13O43567 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF13O43567 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms