Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.84■□□□□ 0.61
SMAD6O43541 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMAD6O43541 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMAD6O43541 AL499627.1-201ENST00000569373 2188 ntBASIC18.83■□□□□ 0.61
SMAD6O43541 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.83■□□□□ 0.61
SMAD6O43541 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SMAD6O43541 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SMAD6O43541 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMAD6O43541 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.83■□□□□ 0.61
SMAD6O43541 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SMAD6O43541 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMAD6O43541 AP000974.1-201ENST00000623909 2387 ntBASIC18.83■□□□□ 0.61
SMAD6O43541 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SMAD6O43541 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.83■□□□□ 0.61
SMAD6O43541 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMAD6O43541 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMAD6O43541 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SMAD6O43541 AC120498.9-201ENST00000339021 3867 ntBASIC18.83■□□□□ 0.61
SMAD6O43541 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.83■□□□□ 0.6
SMAD6O43541 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.83■□□□□ 0.6
SMAD6O43541 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.83■□□□□ 0.6
SMAD6O43541 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.83■□□□□ 0.6
SMAD6O43541 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SMAD6O43541 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMAD6O43541 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SMAD6O43541 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMAD6O43541 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMAD6O43541 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMAD6O43541 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMAD6O43541 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMAD6O43541 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMAD6O43541 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMAD6O43541 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.83■□□□□ 0.6
SMAD6O43541 AC099343.3-201ENST00000605834 2503 ntBASIC18.82■□□□□ 0.6
SMAD6O43541 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD6O43541 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD6O43541 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.82■□□□□ 0.6
SMAD6O43541 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD6O43541 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.82■□□□□ 0.6
SMAD6O43541 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD6O43541 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD6O43541 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SMAD6O43541 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD6O43541 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD6O43541 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.82■□□□□ 0.6
SMAD6O43541 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.82■□□□□ 0.6
SMAD6O43541 ZNF444P1-201ENST00000559497 298 ntBASIC18.82■□□□□ 0.6
SMAD6O43541 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.82■□□□□ 0.6
SMAD6O43541 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SMAD6O43541 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.82■□□□□ 0.6
SMAD6O43541 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD6O43541 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD6O43541 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.82■□□□□ 0.6
SMAD6O43541 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.82■□□□□ 0.6
SMAD6O43541 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD6O43541 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMAD6O43541 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SMAD6O43541 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 AIRN-201ENST00000601203 4374 ntBASIC18.81■□□□□ 0.6
SMAD6O43541 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.81■□□□□ 0.6
SMAD6O43541 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SMAD6O43541 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.81■□□□□ 0.6
SMAD6O43541 KRT18P41-201ENST00000518924 1277 ntBASIC18.81■□□□□ 0.6
SMAD6O43541 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SMAD6O43541 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.81■□□□□ 0.6
SMAD6O43541 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.81■□□□□ 0.6
SMAD6O43541 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMAD6O43541 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SMAD6O43541 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD6O43541 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD6O43541 AC005332.1-201ENST00000577698 1310 ntBASIC18.8■□□□□ 0.6
SMAD6O43541 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD6O43541 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD6O43541 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD6O43541 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD6O43541 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.8■□□□□ 0.6
SMAD6O43541 PCED1CP-201ENST00000419887 785 ntBASIC18.8■□□□□ 0.6
SMAD6O43541 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.8■□□□□ 0.6
SMAD6O43541 VENTXP5-201ENST00000523979 775 ntBASIC18.8■□□□□ 0.6
SMAD6O43541 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.8■□□□□ 0.6
SMAD6O43541 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD6O43541 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD6O43541 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms