Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
MSI1O43347 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MSI1O43347 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.36■□□□□ 0.69
MSI1O43347 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
MSI1O43347 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MSI1O43347 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MSI1O43347 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MSI1O43347 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.35■□□□□ 0.69
MSI1O43347 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
MSI1O43347 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MSI1O43347 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.35■□□□□ 0.69
MSI1O43347 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MSI1O43347 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.35■□□□□ 0.69
MSI1O43347 AL499627.1-201ENST00000569373 2188 ntBASIC19.35■□□□□ 0.69
MSI1O43347 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.35■□□□□ 0.69
MSI1O43347 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 ARMC10P1-201ENST00000313754 855 ntBASIC19.35■□□□□ 0.69
MSI1O43347 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.35■□□□□ 0.69
MSI1O43347 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.35■□□□□ 0.69
MSI1O43347 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.35■□□□□ 0.69
MSI1O43347 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.35■□□□□ 0.69
MSI1O43347 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
MSI1O43347 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
MSI1O43347 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.35■□□□□ 0.69
MSI1O43347 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.35■□□□□ 0.69
MSI1O43347 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
MSI1O43347 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MSI1O43347 AC099343.3-201ENST00000605834 2503 ntBASIC19.34■□□□□ 0.69
MSI1O43347 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
MSI1O43347 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
MSI1O43347 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MSI1O43347 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.34■□□□□ 0.69
MSI1O43347 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.34■□□□□ 0.69
MSI1O43347 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.34■□□□□ 0.69
MSI1O43347 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.34■□□□□ 0.69
MSI1O43347 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.34■□□□□ 0.69
MSI1O43347 HOMER2P1-201ENST00000455653 964 ntBASIC19.34■□□□□ 0.69
MSI1O43347 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 AC087388.1-201ENST00000571370 1112 ntBASIC19.34■□□□□ 0.69
MSI1O43347 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.34■□□□□ 0.69
MSI1O43347 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.34■□□□□ 0.69
MSI1O43347 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
MSI1O43347 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.34■□□□□ 0.69
MSI1O43347 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
MSI1O43347 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MSI1O43347 HOXB1-202ENST00000577092 1414 ntBASIC19.34■□□□□ 0.69
MSI1O43347 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.33■□□□□ 0.69
MSI1O43347 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
MSI1O43347 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MSI1O43347 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
MSI1O43347 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
MSI1O43347 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.33■□□□□ 0.69
MSI1O43347 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
MSI1O43347 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MSI1O43347 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.33■□□□□ 0.68
MSI1O43347 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.33■□□□□ 0.68
MSI1O43347 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MSI1O43347 LINC01238-205ENST00000567549 1107 ntBASIC19.33■□□□□ 0.68
MSI1O43347 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.33■□□□□ 0.68
MSI1O43347 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.33■□□□□ 0.68
MSI1O43347 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MSI1O43347 MYC-208ENST00000641036 567 ntBASIC19.33■□□□□ 0.68
MSI1O43347 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
MSI1O43347 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
MSI1O43347 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
MSI1O43347 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MSI1O43347 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.33■□□□□ 0.68
MSI1O43347 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.33■□□□□ 0.68
MSI1O43347 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
MSI1O43347 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms