Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 POM121L3P-201ENST00000419331 1163 ntBASIC17.5■□□□□ 0.39
RRP8O43159 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.5■□□□□ 0.39
RRP8O43159 AC005104.2-201ENST00000427818 678 ntBASIC17.5■□□□□ 0.39
RRP8O43159 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RRP8O43159 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.5■□□□□ 0.39
RRP8O43159 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.5■□□□□ 0.39
RRP8O43159 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.5■□□□□ 0.39
RRP8O43159 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RRP8O43159 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RRP8O43159 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RRP8O43159 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RRP8O43159 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RRP8O43159 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RRP8O43159 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.5■□□□□ 0.39
RRP8O43159 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RRP8O43159 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RRP8O43159 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RRP8O43159 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RRP8O43159 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.5■□□□□ 0.39
RRP8O43159 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.5■□□□□ 0.39
RRP8O43159 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RRP8O43159 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RRP8O43159 AC009237.14-201ENST00000609975 1594 ntBASIC17.49■□□□□ 0.39
RRP8O43159 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RRP8O43159 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RRP8O43159 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.49■□□□□ 0.39
RRP8O43159 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RRP8O43159 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
RRP8O43159 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RRP8O43159 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RRP8O43159 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RRP8O43159 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RRP8O43159 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RRP8O43159 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RRP8O43159 KRT18P23-201ENST00000435622 1283 ntBASIC17.49■□□□□ 0.39
RRP8O43159 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.49■□□□□ 0.39
RRP8O43159 RPL13AP23-201ENST00000480739 586 ntBASIC17.49■□□□□ 0.39
RRP8O43159 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.49■□□□□ 0.39
RRP8O43159 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.49■□□□□ 0.39
RRP8O43159 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RRP8O43159 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.49■□□□□ 0.39
RRP8O43159 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.49■□□□□ 0.39
RRP8O43159 AC010240.3-201ENST00000607688 395 ntBASIC17.49■□□□□ 0.39
RRP8O43159 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.49■□□□□ 0.39
RRP8O43159 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.49■□□□□ 0.39
RRP8O43159 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RRP8O43159 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RRP8O43159 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RRP8O43159 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RRP8O43159 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RRP8O43159 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RRP8O43159 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.48■□□□□ 0.39
RRP8O43159 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RRP8O43159 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.48■□□□□ 0.39
RRP8O43159 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RRP8O43159 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RRP8O43159 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RRP8O43159 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RRP8O43159 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RRP8O43159 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RRP8O43159 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.48■□□□□ 0.39
RRP8O43159 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RRP8O43159 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RRP8O43159 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RRP8O43159 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RRP8O43159 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RRP8O43159 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RRP8O43159 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.48■□□□□ 0.39
RRP8O43159 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RRP8O43159 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
RRP8O43159 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.47■□□□□ 0.39
RRP8O43159 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RRP8O43159 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.47■□□□□ 0.39
RRP8O43159 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.47■□□□□ 0.39
RRP8O43159 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.47■□□□□ 0.39
RRP8O43159 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RRP8O43159 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.47■□□□□ 0.39
RRP8O43159 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RRP8O43159 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.47■□□□□ 0.39
RRP8O43159 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.47■□□□□ 0.39
RRP8O43159 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.47■□□□□ 0.39
RRP8O43159 AC011840.4-201ENST00000578471 627 ntBASIC17.47■□□□□ 0.39
RRP8O43159 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.47■□□□□ 0.39
RRP8O43159 AL591684.3-201ENST00000605187 298 ntBASIC17.47■□□□□ 0.39
RRP8O43159 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
RRP8O43159 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.47■□□□□ 0.39
RRP8O43159 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RRP8O43159 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms