Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.67■□□□□ 0.58
COPEO14579 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.67■□□□□ 0.58
COPEO14579 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.67■□□□□ 0.58
COPEO14579 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.67■□□□□ 0.58
COPEO14579 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.67■□□□□ 0.58
COPEO14579 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
COPEO14579 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.67■□□□□ 0.58
COPEO14579 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.67■□□□□ 0.58
COPEO14579 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
COPEO14579 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
COPEO14579 AC083880.1-201ENST00000608266 535 ntBASIC18.67■□□□□ 0.58
COPEO14579 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.67■□□□□ 0.58
COPEO14579 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.67■□□□□ 0.58
COPEO14579 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.67■□□□□ 0.58
COPEO14579 ESPNP-201ENST00000270691 2015 ntBASIC18.67■□□□□ 0.58
COPEO14579 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.67■□□□□ 0.58
COPEO14579 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.67■□□□□ 0.58
COPEO14579 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.67■□□□□ 0.58
COPEO14579 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPEO14579 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COPEO14579 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
COPEO14579 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.66■□□□□ 0.58
COPEO14579 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.66■□□□□ 0.58
COPEO14579 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COPEO14579 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 NBPF21P-201ENST00000425093 1451 ntBASIC18.66■□□□□ 0.58
COPEO14579 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.66■□□□□ 0.58
COPEO14579 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.66■□□□□ 0.58
COPEO14579 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
COPEO14579 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.66■□□□□ 0.58
COPEO14579 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.66■□□□□ 0.58
COPEO14579 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.66■□□□□ 0.58
COPEO14579 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.66■□□□□ 0.58
COPEO14579 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.66■□□□□ 0.58
COPEO14579 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.66■□□□□ 0.58
COPEO14579 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COPEO14579 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
COPEO14579 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPEO14579 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
COPEO14579 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
COPEO14579 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.65■□□□□ 0.58
COPEO14579 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COPEO14579 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.65■□□□□ 0.58
COPEO14579 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
COPEO14579 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.65■□□□□ 0.58
COPEO14579 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.65■□□□□ 0.58
COPEO14579 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.65■□□□□ 0.58
COPEO14579 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 AC004264.1-201ENST00000608354 794 ntBASIC18.65■□□□□ 0.58
COPEO14579 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.65■□□□□ 0.58
COPEO14579 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COPEO14579 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COPEO14579 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COPEO14579 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms