Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.99■□□□□ 0.95
DDX39AO00148 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
DDX39AO00148 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.99■□□□□ 0.95
DDX39AO00148 AL358472.4-201ENST00000633140 710 ntBASIC20.99■□□□□ 0.95
DDX39AO00148 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.99■□□□□ 0.95
DDX39AO00148 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX39AO00148 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
DDX39AO00148 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
DDX39AO00148 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
DDX39AO00148 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DDX39AO00148 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DDX39AO00148 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX39AO00148 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX39AO00148 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX39AO00148 AC006333.2-201ENST00000607957 2099 ntBASIC20.98■□□□□ 0.95
DDX39AO00148 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
DDX39AO00148 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX39AO00148 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX39AO00148 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX39AO00148 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
DDX39AO00148 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX39AO00148 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX39AO00148 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX39AO00148 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX39AO00148 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX39AO00148 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX39AO00148 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
DDX39AO00148 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX39AO00148 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
DDX39AO00148 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX39AO00148 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX39AO00148 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX39AO00148 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX39AO00148 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX39AO00148 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX39AO00148 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX39AO00148 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX39AO00148 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX39AO00148 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX39AO00148 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX39AO00148 AC092597.1-201ENST00000487352 616 ntBASIC20.97■□□□□ 0.95
DDX39AO00148 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX39AO00148 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.97■□□□□ 0.95
DDX39AO00148 AC083849.1-201ENST00000615227 514 ntBASIC20.97■□□□□ 0.95
DDX39AO00148 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.97■□□□□ 0.95
DDX39AO00148 AL157888.1-201ENST00000631930 593 ntBASIC20.97■□□□□ 0.95
DDX39AO00148 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DDX39AO00148 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DDX39AO00148 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
DDX39AO00148 Z98044.1-201ENST00000632503 1764 ntBASIC20.97■□□□□ 0.95
DDX39AO00148 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.97■□□□□ 0.95
DDX39AO00148 AC099343.3-201ENST00000605834 2503 ntBASIC20.97■□□□□ 0.95
DDX39AO00148 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.96■□□□□ 0.95
DDX39AO00148 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
DDX39AO00148 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX39AO00148 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX39AO00148 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.96■□□□□ 0.95
DDX39AO00148 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 HYMAI.1-201ENST00000620949 238 ntBASIC20.96■□□□□ 0.95
DDX39AO00148 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.96■□□□□ 0.95
DDX39AO00148 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 AC034236.2-201ENST00000606662 1610 ntBASIC20.96■□□□□ 0.95
DDX39AO00148 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.96■□□□□ 0.95
DDX39AO00148 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
DDX39AO00148 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.96■□□□□ 0.95
DDX39AO00148 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DDX39AO00148 LINC01311-201ENST00000565162 1445 ntBASIC20.95■□□□□ 0.95
DDX39AO00148 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX39AO00148 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX39AO00148 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX39AO00148 AC034232.1-201ENST00000506026 1064 ntBASIC20.95■□□□□ 0.94
DDX39AO00148 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.95■□□□□ 0.94
DDX39AO00148 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX39AO00148 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.95■□□□□ 0.94
DDX39AO00148 AC083906.6-201ENST00000641366 219 ntBASIC20.95■□□□□ 0.94
DDX39AO00148 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX39AO00148 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
DDX39AO00148 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
DDX39AO00148 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX39AO00148 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX39AO00148 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
DDX39AO00148 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX39AO00148 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.95■□□□□ 0.94
DDX39AO00148 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
DDX39AO00148 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX39AO00148 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX39AO00148 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX39AO00148 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms