Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC012317.2-201ENST00000623305 2251 ntBASIC13.27□□□□□ -0.28
LINC01549A6NIU2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01549A6NIU2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 AL390719.1-204ENST00000412397 1219 ntBASIC13.27□□□□□ -0.29
LINC01549A6NIU2 AC073210.2-201ENST00000430369 194 ntBASIC13.27□□□□□ -0.29
LINC01549A6NIU2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 FLJ13224-201ENST00000313737 1514 ntBASIC13.27□□□□□ -0.29
LINC01549A6NIU2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC01549A6NIU2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 AC084018.2-201ENST00000613093 2607 ntBASIC13.26□□□□□ -0.29
LINC01549A6NIU2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 KRT18P11-201ENST00000435214 1283 ntBASIC13.26□□□□□ -0.29
LINC01549A6NIU2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.26□□□□□ -0.29
LINC01549A6NIU2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.26□□□□□ -0.29
LINC01549A6NIU2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 PCDHA12-202ENST00000613593 2588 ntBASIC13.26□□□□□ -0.29
LINC01549A6NIU2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC01549A6NIU2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 HEIH-201ENST00000623091 1652 ntBASIC13.25□□□□□ -0.29
LINC01549A6NIU2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms