Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC01546A6NGU7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 CNN2P6-201ENST00000439038 900 ntBASIC13.17□□□□□ -0.3
LINC01546A6NGU7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01546A6NGU7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 AC110285.6-201ENST00000617652 491 ntBASIC13.16□□□□□ -0.3
LINC01546A6NGU7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC01546A6NGU7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 RAP2CP1-201ENST00000605103 478 ntBASIC13.15□□□□□ -0.3
LINC01546A6NGU7 AL121906.2-201ENST00000621597 723 ntBASIC13.15□□□□□ -0.3
LINC01546A6NGU7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.15□□□□□ -0.3
LINC01546A6NGU7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms