Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 DUSP5P1-201ENST00000441325 1139 ntBASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 TSSC2-201ENST00000450217 709 ntBASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 AC092329.2-201ENST00000598402 547 ntBASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 NPAP1P7-201ENST00000613027 823 ntBASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TBC1D3FA6NER0 AC016734.2-201ENST00000624325 1377 ntBASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 MIR662-201ENST00000384847 95 ntBASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 AC068587.9-201ENST00000641814 219 ntBASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TBC1D3FA6NER0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 AL450487.1-201ENST00000426799 995 ntBASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.54■□□□□ 0.56
TBC1D3FA6NER0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms