Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
MEIS3P1A6NDR6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.01■□□□□ 0.15
MEIS3P1A6NDR6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MEIS3P1A6NDR6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 SERPINH1P1-201ENST00000419794 1249 ntBASIC16■□□□□ 0.15
MEIS3P1A6NDR6 AC073210.2-201ENST00000430369 194 ntBASIC16■□□□□ 0.15
MEIS3P1A6NDR6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 OR2A1-AS1-201ENST00000462305 773 ntBASIC16■□□□□ 0.15
MEIS3P1A6NDR6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 AC087623.3-201ENST00000607047 1098 ntBASIC16■□□□□ 0.15
MEIS3P1A6NDR6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MEIS3P1A6NDR6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 AC006015.1-201ENST00000429970 570 ntBASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.99■□□□□ 0.15
MEIS3P1A6NDR6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 BX276092.2-201ENST00000417668 665 ntBASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 TUBB8P6-201ENST00000436895 1288 ntBASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 AL121906.2-201ENST00000621597 723 ntBASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MEIS3P1A6NDR6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms