Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.18■□□□□ 0.82
CCDC66A2RUB6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CCDC66A2RUB6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.17■□□□□ 0.82
CCDC66A2RUB6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 AL513477.1-201ENST00000602865 2407 ntBASIC20.17■□□□□ 0.82
CCDC66A2RUB6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC66A2RUB6 MST1L-201ENST00000442552 2185 ntBASIC20.17■□□□□ 0.82
CCDC66A2RUB6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 IRX1P1-201ENST00000438849 1838 ntBASIC20.16■□□□□ 0.82
CCDC66A2RUB6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 TUBB8P6-201ENST00000436895 1288 ntBASIC20.16■□□□□ 0.82
CCDC66A2RUB6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CCDC66A2RUB6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC66A2RUB6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms