Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV5S1A1TA0A578 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV5S1A1TA0A578 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV5S1A1TA0A578 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TCRBV5S1A1TA0A578 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV5S1A1TA0A578 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV5S1A1TA0A578 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV5S1A1TA0A578 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TCRBV5S1A1TA0A578 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV5S1A1TA0A578 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV5S1A1TA0A578 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 ESPNP-201ENST00000270691 2015 ntBASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 AC093677.2-201ENST00000600169 1863 ntBASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 AC135776.1-201ENST00000319817 2481 ntBASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV5S1A1TA0A578 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 KRT8P7-201ENST00000533003 1432 ntBASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV5S1A1TA0A578 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 ABALON-201ENST00000629058 1903 ntBASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 SDHAP2-201ENST00000455183 2001 ntBASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 AL163051.1-201ENST00000569214 1512 ntBASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 ECEL1P2-202ENST00000465689 757 ntBASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 AC120498.9-201ENST00000339021 3867 ntBASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRBV5S1A1TA0A578 AC007613.1-201ENST00000572811 2597 ntBASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 KRT18P23-201ENST00000435622 1283 ntBASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 AC128688.1-201ENST00000487626 519 ntBASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCRBV5S1A1TA0A578 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms