Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 GUSBP6-202ENST00000438529 1198 ntBASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 MIR4758-201ENST00000577688 71 ntBASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV5A0A0B4J249 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 MTMR9LP-203ENST00000426597 1545 ntBASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 ESPNP-201ENST00000270691 2015 ntBASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 AL137784.2-201ENST00000607332 1000 ntBASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV5A0A0B4J249 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV5A0A0B4J249 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms