Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV1-1A0A0B4J248 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV1-1A0A0B4J248 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
TRAV1-1A0A0B4J248 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms