Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 HCG4P8-203ENST00000443049 980 ntBASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 AC011498.5-201ENST00000592027 486 ntBASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 AL357033.4-201ENST00000617703 1807 ntBASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 AC005332.7-201ENST00000614046 2005 ntBASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV5A0A0B4J1U4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 BX276092.5-203ENST00000456199 560 ntBASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 AC009065.1-201ENST00000564055 1225 ntBASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 AL162741.1-201ENST00000565563 1558 ntBASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.71■□□□□ 0.27
TRGV5A0A0B4J1U4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRGV5A0A0B4J1U4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRGV5A0A0B4J1U4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRGV5A0A0B4J1U4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.26
TRGV5A0A0B4J1U4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 MIR662-201ENST00000384847 95 ntBASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 PVRIG2P-201ENST00000435460 978 ntBASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 AL121672.3-201ENST00000608644 468 ntBASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV5A0A0B4J1U4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 AC083906.6-201ENST00000641366 219 ntBASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV5A0A0B4J1U4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms