Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 AC011506.1-201ENST00000474329 610 ntBASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 LTB4R2-202ENST00000528054 3092 ntBASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV5-3A0A0A0MS03 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 FLJ13224-201ENST00000313737 1514 ntBASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 AC073648.6-201ENST00000641589 218 ntBASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 AL031985.4-201ENST00000642138 673 ntBASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV5-3A0A0A0MS03 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 FAM207BP-201ENST00000447172 505 ntBASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms