Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.66■□□□□ 0.42
AP4S1Q9Y587 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 TSPY21P-201ENST00000433481 731 ntBASIC17.66■□□□□ 0.42
AP4S1Q9Y587 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.66■□□□□ 0.42
AP4S1Q9Y587 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4S1Q9Y587 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 AC124067.4-201ENST00000519691 2379 ntBASIC17.65■□□□□ 0.42
AP4S1Q9Y587 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.65■□□□□ 0.42
AP4S1Q9Y587 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 CYP2T1P-201ENST00000432607 1285 ntBASIC17.65■□□□□ 0.42
AP4S1Q9Y587 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4S1Q9Y587 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP4S1Q9Y587 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
AP4S1Q9Y587 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP4S1Q9Y587 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP4S1Q9Y587 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP4S1Q9Y587 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP4S1Q9Y587 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.64■□□□□ 0.42
AP4S1Q9Y587 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP4S1Q9Y587 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.64■□□□□ 0.42
AP4S1Q9Y587 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 AC073210.2-201ENST00000430369 194 ntBASIC17.64■□□□□ 0.41
AP4S1Q9Y587 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 AC080080.1-201ENST00000625121 2420 ntBASIC17.64■□□□□ 0.41
AP4S1Q9Y587 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4S1Q9Y587 AC141586.5-201ENST00000624546 2050 ntBASIC17.63■□□□□ 0.41
AP4S1Q9Y587 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.63■□□□□ 0.41
AP4S1Q9Y587 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms