Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RCL1Q9Y2P8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 SIRPAP1-201ENST00000448467 1770 ntBASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 AL499627.1-201ENST00000569373 2188 ntBASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 OR10C1-204ENST00000622521 1039 ntBASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RCL1Q9Y2P8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.27■□□□□ 0.03
RCL1Q9Y2P8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 AC137761.2-201ENST00000561729 223 ntBASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 AC145350.3-201ENST00000569033 163 ntBASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RCL1Q9Y2P8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms