Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF6Q9Y252 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.6■□□□□ 0.41
RNF6Q9Y252 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF6Q9Y252 CR392000.1-201ENST00000624770 1228 ntBASIC17.6■□□□□ 0.41
RNF6Q9Y252 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF6Q9Y252 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF6Q9Y252 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF6Q9Y252 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF6Q9Y252 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF6Q9Y252 AC018553.1-201ENST00000616682 1458 ntBASIC17.6■□□□□ 0.41
RNF6Q9Y252 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF6Q9Y252 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF6Q9Y252 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF6Q9Y252 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF6Q9Y252 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
RNF6Q9Y252 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 AC068880.1-201ENST00000507289 2297 ntBASIC17.59■□□□□ 0.41
RNF6Q9Y252 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 AL445228.2-201ENST00000605589 952 ntBASIC17.59■□□□□ 0.41
RNF6Q9Y252 AC005363.2-201ENST00000618631 242 ntBASIC17.59■□□□□ 0.41
RNF6Q9Y252 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF6Q9Y252 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RNF6Q9Y252 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.58■□□□□ 0.41
RNF6Q9Y252 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.58■□□□□ 0.41
RNF6Q9Y252 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF6Q9Y252 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF6Q9Y252 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF6Q9Y252 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF6Q9Y252 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF6Q9Y252 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF6Q9Y252 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF6Q9Y252 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF6Q9Y252 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF6Q9Y252 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF6Q9Y252 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RNF6Q9Y252 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF6Q9Y252 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
RNF6Q9Y252 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF6Q9Y252 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF6Q9Y252 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 NIFKP9-201ENST00000419265 221 ntBASIC17.58■□□□□ 0.4
RNF6Q9Y252 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF6Q9Y252 KSR1P1-201ENST00000446298 240 ntBASIC17.58■□□□□ 0.4
RNF6Q9Y252 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF6Q9Y252 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF6Q9Y252 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF6Q9Y252 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF6Q9Y252 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF6Q9Y252 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF6Q9Y252 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF6Q9Y252 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF6Q9Y252 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms