Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SAMD4AQ9UPU9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SAMD4AQ9UPU9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SAMD4AQ9UPU9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SAMD4AQ9UPU9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SAMD4AQ9UPU9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SAMD4AQ9UPU9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SAMD4AQ9UPU9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.5■□□□□ 0.39
SAMD4AQ9UPU9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SAMD4AQ9UPU9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 ESPNP-201ENST00000270691 2015 ntBASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 KRT8P41-201ENST00000533985 1514 ntBASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 AL137784.2-201ENST00000607332 1000 ntBASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 AC004264.1-201ENST00000608354 794 ntBASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 AC135776.1-201ENST00000319817 2481 ntBASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SAMD4AQ9UPU9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 GNAS-203ENST00000306120 1878 ntBASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 GUSBP6-202ENST00000438529 1198 ntBASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.48■□□□□ 0.39
SAMD4AQ9UPU9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 SLC25A6P5-201ENST00000435663 894 ntBASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 TSPY6P-201ENST00000448518 926 ntBASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 NBPF21P-201ENST00000425093 1451 ntBASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 KRT8P32-201ENST00000512863 1461 ntBASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SAMD4AQ9UPU9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms